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13_2_20cm_scaffold_993

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_993_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1240)
DNA (1239bp) protein (413aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rho
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217N0_RHOPB
multi-sensor signal transduction histidine kinase
13_2_20cm_scaffold_993_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1490..1981)
DNA (492bp) protein (164aa)
Peptidase M protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IBU5_AZOC5
pepN; aminopeptidase N
Peptidase M protein {ECO:0000313|EMBL:BAF89118.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans
13_2_20cm_scaffold_993_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1978..2535)
DNA (558bp) protein (186aa)
Membrane alanine aminopeptidase N n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBU8_9RHOB
Membrane alanine aminopeptidase N {ECO:0000313|EMBL:EJW10194.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovul
aminopeptidase N
13_2_20cm_scaffold_993_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2523..3935)
DNA (1413bp) protein (471aa)
Aminopeptidase N n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5E9_STAND rbh
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:ADH88073.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8
13_2_20cm_scaffold_993_5
bacterium YEK0313, Bacteria

Not on your lists

4104..5072
DNA (969bp) protein (323aa)
Uncharacterized protein UPF0065 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46NU2_CUPPJ
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ10834.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
13_2_20cm_scaffold_993_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5145..6155
DNA (1011bp) protein (337aa)
alcohol dehydrogenase n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003677224
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:EIM27891.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" so
zinc-binding alcohol dehydrogenase family protein
13_2_20cm_scaffold_993_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6198..7016)
DNA (819bp) protein (273aa)
Cobalt-zinc-cadmium resistance protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DSE4_9RHOB
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EJW09357.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rho
cation diffusion facilitator family transporter
13_2_20cm_scaffold_993_8
unknown

Not on your lists

7063..7341
DNA (279bp) protein (93aa)

This feature has no annotations

13_2_20cm_scaffold_993_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7815..8819
DNA (1005bp) protein (335aa)
dusA; tRNA-dihydrouridine synthase A (EC:1.-.-.-)
tRNA-dihydrouridine synthase A {ECO:0000313|EMBL:AEI06232.1}; EC=1.-.-.- {ECO:0000313|EMBL:AEI06232.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
tRNA-dihydrouridine synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JE24_OLICO
13_2_20cm_scaffold_993_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8847..9680
DNA (834bp) protein (278aa)
membrane protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314175C
permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
permease
13_2_20cm_scaffold_993_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9685..10383)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J6G8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11740.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
aspartyl protease
13_2_20cm_scaffold_993_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10565..11176
DNA (612bp) protein (204aa)
Glutathione S-transferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MA75_9RHIZ
Glutathione S-transferase {ECO:0000313|EMBL:EKF17905.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireducto
glutathione S-transferase
13_2_20cm_scaffold_993_13
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11178..11921
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030754BF
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACK50299.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella si
13_2_20cm_scaffold_993_14
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11943..12812)
DNA (870bp) protein (290aa)
oxidoreductase 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
Putative oxidoreductase 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0THC4_9BRAD
Oxidoreductase {ECO:0000313|EMBL:KJC51248.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885
13_2_20cm_scaffold_993_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12971..14101
DNA (1131bp) protein (377aa)
Scaffold protein for [4Fe-4S] cluster assembly ApbC n=1 Tax=Rhodovulum sp. PH10 RepID=J6UDZ3_9RHOB rbh
Scaffold protein for [4Fe-4S] cluster assembly ApbC {ECO:0000313|EMBL:EJW11736.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;
ATP/GTP-binding-like protein
13_2_20cm_scaffold_993_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14120..14815)
DNA (696bp) protein (232aa)
Haloacid dehalogenase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4J2_9RHIZ rbh
haloacid dehalogenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
haloacid dehalogenase
13_2_20cm_scaffold_993_17
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15088..16182
DNA (1095bp) protein (365aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C6276
Putative periplasmic mannitol-binding protein Trap-T transport system, dctP subunit {ECO:0000313|EMBL:CCE01479.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
ABC transporter substrate-binding protein
13_2_20cm_scaffold_993_18
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16252..17331
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PN33_9BRAD rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR74761.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
twin-arginine translocation pathway signal
13_2_20cm_scaffold_993_19
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17558..18181
DNA (624bp) protein (208aa)
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YNK1_9BRAD
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component {ECO:0000313|EMBL:EHR06084.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria
mannitol-binding protein
Displaying 19 items

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