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13_2_20cm_scaffold_286_20

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 22050..22589

Top 3 Functional Annotations

Value Algorithm Source
putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 177.0
  • Bit_score: 175
  • Evalue 7.20e-41
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24533805 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 177.0
  • Bit_score: 166
  • Evalue 3.10e-38
algT; RNA polymerase sigma-22 factor AlgT similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 187.0
  • Bit_score: 128
  • Evalue 2.00e-27

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Taxonomy

R_Gammaproteobacteria_63_22 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGAAAGAGGACGATGACGCGACGCTGGTGCGACGCTGTCGGGAGGGGGACCGGGCGGCTTTCGAGCAGCTCGTGGTGCGGTATCAGAAGCCGGTGTTCAATGCCGCCCTTCGGCTGCTGCACGATCCGGAGGACGCCCGGGACGTCGCGCAGACCACGTTCCTCAAGGCGTTCGAGCATCTTGGCGACTATGACCCGAGCTTCAAGTTCTACAGCTGGATCTACCGGATTGCGGTCAATGAATCCCTCAATGCCCTCGGCGCACGAAAACCCCACGAGGGGTTTGACGGCGATGAGGCCGATGAGGCTCCGGGGCCGGATCGACAGCTCGAGGGCGAGCAGATGGGCCAGGCGATCGAGGAGGCGCTGATGCACATCAAGCCCGAACTGCGCGCTGTCATCGTGCTGCGGCACTTCATGCACTTGAGCTACCAGGACATGGGCCAGGTCCTCCTGCTCCCCGAGAAAACCGTGAAGTCACGGCTCTACAGTGCCCGCCAGCTGCTGCGGGATCACTTACTCCAGCTGGGAACCATCTGA
PROTEIN sequence
Length: 180
VKEDDDATLVRRCREGDRAAFEQLVVRYQKPVFNAALRLLHDPEDARDVAQTTFLKAFEHLGDYDPSFKFYSWIYRIAVNESLNALGARKPHEGFDGDEADEAPGPDRQLEGEQMGQAIEEALMHIKPELRAVIVLRHFMHLSYQDMGQVLLLPEKTVKSRLYSARQLLRDHLLQLGTI*