name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_2_20cm_scaffold_286_1
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..1809
|
Probable potassium transport system protein kup n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SVW0_9BRAD
rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;
trkD; KUP family potassium transport system low affinity
|
|
13_2_20cm_scaffold_286_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
1821..3881
|
S9C (acylaminoacyl-peptidase) family peptidase (EC:3.4.21.-)
Peptidase, S9C (Acylaminoacyl-peptidase) family {ECO:0000313|EMBL:ACO31580.1}; EC=3.4.21.- {ECO:0000313|EMBL:ACO31580.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteri
Peptidase, S9C (Acylaminoacyl-peptidase) family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F649_ACIC5
|
|
13_2_20cm_scaffold_286_3
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3909..4646)
|
cbbZ; phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_00495};; EC=3.1.3.1
Phosphoglycolate phosphatase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GND3_CUPNN
|
|
13_2_20cm_scaffold_286_4
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4643..6673)
|
cbbT; transketolase (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rh
Transketolase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYN2_RHOCS
rbh
|
|
13_2_20cm_scaffold_286_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6690..7562)
|
Phosphoribulokinase (EC:2.7.1.19); K00855 phosphoribulokinase [EC:2.7.1.19] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTK3_9BURK
rbh
|
|
13_2_20cm_scaffold_286_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7603..8682)
|
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
cbbFC1; Fructose-1,6-bisphosphatase (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTK4_9BURK
rbh
|
|
13_2_20cm_scaffold_286_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8702..9688)
|
Rubisco accessory protein CbbX, AAA ATPase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVA5_RUBGI
rbh
cbbX; rubisco accessory protein CbbX, AAA ATPase
Rubisco accessory protein CbbX, AAA ATPase {ECO:0000313|EMBL:BAL96942.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatino
|
|
13_2_20cm_scaffold_286_8
Leptothrix ochracea, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9690..10388)
|
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=735332 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptot
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Leptothrix ochracea L12 RepID=I4Z5D5_9BURK
rbh
|
|
13_2_20cm_scaffold_286_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10408..10857)
|
cbbS; ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit CbbS (EC:4.1.1.39)
Ribulose bisphosphate carboxylase small subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTK6_9BURK
Ribulose bisphosphate carboxylase small subunit {ECO:0000313|EMBL:EHR69079.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium
|
|
13_2_20cm_scaffold_286_10
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10881..12362)
|
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain 1 {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit 1 {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; Tax
Ribulose bisphosphate carboxylase large chain 1 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=RBL1A_METPP
rbh
|
|
13_2_20cm_scaffold_286_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12460..13431
|
Transcriptional regulator n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTK8_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EHR69081.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
LysR family transcriptional regulator
|
|
13_2_20cm_scaffold_286_12
unknown
|
Not on your lists |
comp(13700..14017)
|
This feature has no annotations |
|
13_2_20cm_scaffold_286_13
unknown
|
Not on your lists |
comp(15061..16578)
|
This feature has no annotations |
|
13_2_20cm_scaffold_286_14
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16778..18670)
|
id=2907553 Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
id=2907553 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
|
|
13_2_20cm_scaffold_286_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18902..20302
|
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J4U5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78056.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
rsbU; serine phosphatase RsbU regulator sigma subunit
|
|
13_2_20cm_scaffold_286_16
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20322..20678
|
Anti-sigma factor antagonist n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W1F2_MAGSA
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magn
anti-anti-sigma regulatory factor
|
|
13_2_20cm_scaffold_286_17
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20675..21115
|
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YZE3_DESAF
putative anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:EGJ51972.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovi
|
|
13_2_20cm_scaffold_286_18
unknown
|
Not on your lists |
21191..21535
|
This feature has no annotations |
|
13_2_20cm_scaffold_286_19
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21666..21983
|
btrV; anti-anti-sigma regulatory factor Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
anti-sigma-factor antagonist id=24533804 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
anti-sigma-factor antagonist
|
|
13_2_20cm_scaffold_286_20
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22050..22589
|
putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24533805 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
algT; RNA polymerase sigma-22 factor AlgT
|
|
13_2_20cm_scaffold_286_21
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22591..23286
|
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
|
|
13_2_20cm_scaffold_286_22
Acinetobacter junii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23388..23915
|
Protein TolA {ECO:0000313|EMBL:ENV63877.1}; TaxID=1217665 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter junii NIPH 182.
|
|
13_2_20cm_scaffold_286_23
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24090..27035
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
hypothetical protein id=24533808 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Prevotella ruminicola genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
rbh
hypothetical protein
|
|
13_2_20cm_scaffold_286_24
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27064..28080
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Putative uncharacterized protein id=4396968 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
|
|
13_2_20cm_scaffold_286_25
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28617..29849
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
UPI0003D06F0D related cluster n=1 Tax=unknown RepID=UPI0003D06F0D
adenylate/guanylate cyclase
|
|
13_2_20cm_scaffold_286_26
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29800..31401
|
Sensory box histidine kinase/response regulator n=2 Tax=Crocosphaera watsonii RepID=T2IZI2_CROWT
response regulator receiver sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
hypothetical protein
|
|
13_2_20cm_scaffold_286_27
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31398..31811
|
chemotaxis protein CheY n=1 Tax=Rhizobium mongolense RepID=UPI0003B792C5
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
response regulator CheY-like domain-containing protein
|
|
13_2_20cm_scaffold_286_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
31808..32185
|
chemotaxis protein CheY n=1 Tax=Spirulina subsalsa RepID=UPI000315FFAA
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
two-component response regulator
|
|
13_2_20cm_scaffold_286_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
32182..33756
|
adenylate/guanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
adenylate/guanylate cyclase id=14429036 bin=bin3_NC10 species=Methyloferula stellata genus=Methyloferula taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
adenylate/guanylate cyclase
|
|
13_2_20cm_scaffold_286_30
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria
|
Not on your lists |
comp(33767..35704)
|
hypothetical protein id=8267367 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
hypothetical protein
|