ggKbase home page

13_2_20cm_scaffold_3415_10

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(8033..8641)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 158.0
  • Bit_score: 242
  • Evalue 7.10e-61
Lipopolysaccharide transport periplasmic protein LptA id=4411420 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 198.0
  • Bit_score: 214
  • Evalue 8.70e-53
OstA-like protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 148.0
  • Bit_score: 101
  • Evalue 3.90e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGACGTGGCGGCCGCTGCTTGCCGCGCTGCTGCTCGTGCTGGCGCCCGCGGTGTCGGGCGGCCAGTCGGCGCCGAAGACTTCGGCAGCCCCCGCCGTCCAGCCGCCGCCCGCGTCGTCCCTCACGCCGAAGGCGAAGGACGCCAAGACCGACGGCGCGCTGCCGCTGACCGTGGACGCGGACAAGATGGAGCGATTCGGAAAGGCGAGCCTCGTCATCTTCAGCGGCAACGTCGTGGCGCGGCGGGACAACTCCGTGCAGTACGCCGATCGCGTCGAGGTCTACATGGACGAGAAGGGCGACCGGGTCCTGAGAACGGTCTCGACCGGGTCGGTCCGCATCATCACCAAGGACTGCCGGACCGGCACGGCCCAGCGCGCGGAGTACTTCGACCTCGATCAGCGGGTGGTGCTCATCGGCAACGCGCGGGTCTGGCAGGACGAGAACGTCGTGTCCGGCGATACGATCACGATCTACGTCGCGCAGGATCGTACGATCGTGGAAGGCGGCAAGCAGGAGCGTGTGAAGGGCATCTTCTACTCCCAGAACGAAAGCAAGCAAGACGGCCAGCCGGCGCCTCGGCGCTCGGCCGAAGTCTGCAAGAACTGA
PROTEIN sequence
Length: 203
VTWRPLLAALLLVLAPAVSGGQSAPKTSAAPAVQPPPASSLTPKAKDAKTDGALPLTVDADKMERFGKASLVIFSGNVVARRDNSVQYADRVEVYMDEKGDRVLRTVSTGSVRIITKDCRTGTAQRAEYFDLDQRVVLIGNARVWQDENVVSGDTITIYVAQDRTIVEGGKQERVKGIFYSQNESKQDGQPAPRRSAEVCKN*