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13_2_20cm_scaffold_5217_1

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 1..669

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 175.0
  • Bit_score: 198
  • Evalue 5.40e-48
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 175.0
  • Bit_score: 198
  • Evalue 7.60e-48
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 179.0
  • Bit_score: 146
  • Evalue 6.90e-33

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 669
GAGGCAGGGGCCGCCGAGGCCCTGATCGCTGCGTACGGAGATCGGGCCTACCGCCTGGCGATGCGCATGACCGGCAACCGCTCGGATGCCGAGGAGGTCGTCCAGGACGCCTTCTGGACAGTGGTCCAGAAGATCGAGACGTTCAGAGGCGATGCGGCCTTCGGCTCCTGGCTCTATCGAATCACCGCAAACTGCGCATATACAAAACTTCGCGTCCGGCGTGCGCGGCATCACGAGACCTCGTTGGACGAGGGTTCGGTGATGGTCGATGAGCATGCCCCGTCCCTTCAGGACTGGTCCGCGCGTGTCGAGGATCCGGCGCTTCAATTCGAGCTGCGGACGGTGTTGACGGCGGCCCTCGACACCCTGCCGGAAGACTACCGCGCCGTCCTGGTGCTTCGCGACGTCGAGGGCCTGTCGGTCCAGGAAGTCAGCCAGATCACTGGGCTGAGTGTCGCCGCCGTGAAGACTCGAGCGCACCGTGCGCGGCTGGTGCTGCGCAAGTGCCTCGGGGAGCACTTCTCGGATCGGCCGCCGTCGCTCCCGGCTTCACCTTCTGTGTCTGCGCCCTCGCCGCGCCGCGGCGAATGGTCGAGCGGGTCGACGCGGCCGCGGCCGCGGTCCGAGCGTCGTATCTCGTCTGGGCGGCGAATCTCATTATCGGTGTGA
PROTEIN sequence
Length: 223
EAGAAEALIAAYGDRAYRLAMRMTGNRSDAEEVVQDAFWTVVQKIETFRGDAAFGSWLYRITANCAYTKLRVRRARHHETSLDEGSVMVDEHAPSLQDWSARVEDPALQFELRTVLTAALDTLPEDYRAVLVLRDVEGLSVQEVSQITGLSVAAVKTRAHRARLVLRKCLGEHFSDRPPSLPASPSVSAPSPRRGEWSSGSTRPRPRSERRISSGRRISLSV*