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13_2_20cm_scaffold_5217

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5217_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1..669
DNA (669bp) protein (223aa)
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_70_23_curated
ECF family RNA polymerase sigma factor
13_2_20cm_scaffold_5217_2
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(727..1215)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P452_STRVO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM84980.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger
13_2_20cm_scaffold_5217_3
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1271..1675)
DNA (405bp) protein (135aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Bur
Signal transduction histidine kinase with CheB and CheR activity n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YHH5_9BURK
signal transduction histidine kinase with CheB and CheR activity
13_2_20cm_scaffold_5217_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1820..2158)
DNA (339bp) protein (113aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TraR/DksA family id=3708851 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TraR/DksA family transcriptional regulator
13_2_20cm_scaffold_5217_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2280..2690
DNA (411bp) protein (137aa)
id=14626280 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_5217_6
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2693..3013
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4B5_9SPHI
hypothetical protein Tax=RBG_16_Gamma2_64_11_curated
hypothetical protein
13_2_20cm_scaffold_5217_7
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3062..3469
DNA (408bp) protein (136aa)
PPOX class probable F dependent enzyme {ECO:0000313|EMBL:KID30679.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3
Uncharacterized protein id=4565259 bin=GWC2_Methylomirabilis_70_24 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_5217_8
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3477..4175)
DNA (699bp) protein (233aa)
Pirin domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U1G3_9CYAN
Pirin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Pirin domain-containing protein
13_2_20cm_scaffold_5217_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4203..4700)
DNA (498bp) protein (166aa)
Ferritin Dps family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNW2_9BACT
Ferritin Dps family protein {ECO:0000313|EMBL:EEF58428.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="
DNA-binding ferritin-like protein
13_2_20cm_scaffold_5217_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4849..5598)
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U856_9CHLR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH80067.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_5217_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5637..6074)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627394 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_5217_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6098..6454)
DNA (357bp) protein (119aa)
Thioredoxin id=4814769 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
trxA; thioredoxin 1, redox factor Tax=GWC2_Rokubacteria_70_16_curated
trxA; thioredoxin 1, redox factor
13_2_20cm_scaffold_5217_13
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6560..7117
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002D49422
MarR family transcriptional regulator {ECO:0000313|EMBL:KIF21405.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
MarR family transcriptional regulator
13_2_20cm_scaffold_5217_14
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(7102..8376)
DNA (1275bp) protein (425aa)
adenylate cyclase (EC:4.6.1.1)
putative signal transduction histidine kinase id=14628408 bin=bin8_Chloro species=Rhodococcus ruber genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
putative signal transduction histidine kinase Tax=CSP1_4_Chloroflexi
13_2_20cm_scaffold_5217_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8478..8831
DNA (354bp) protein (118aa)
acriflavin resistance protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A72B4B
RND superfamily multidrug efflux pump component Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
acriflavin resistance protein
Displaying 15 items

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