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13_2_20cm_scaffold_584_1

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 3..563

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTS9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 172.0
  • Bit_score: 92
  • Evalue 4.60e-16
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KJR11591.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 172.0
  • Bit_score: 95
  • Evalue 7.60e-17
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 172.0
  • Bit_score: 89
  • Evalue 8.40e-16

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Taxonomy

Nocardioides luteus → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 561
GAGGCTTATGAGCCAGGCTCCAGGGAGGACTTCGACCGCCTTTACCGGACCGCCTATCCGCGCGTGTACCGCACGCTCGCGGCGATCCTGGGCGACCGGGAAGCGGCTGAAGACTGCGTCCAGGACGCCTTCGTGCAGGCGTTTCAGGCCTGGAAACGCTGGCGGCCGGACGCGCCTGCGGAAGCCTGGGTGCACAGGATCGCCGTCAACCGCGCCATCTCCTATCGCCGCAGCGCCAAGCTGCGCCAGATCGGTGAGGTCGTGCGGCGGCTCGGCCGGCCCGTGCATCCGGCGGACCCGGCGGACATCGCGGCGCAGGGTGACCTCCTGACCGCGCTGCGCTCGCTTCCTCCCAAACTCGCGGCCGCGATCGTGCTGCGTCACTACCACGGCTACAACAACCGGGAGATCGCCGCCGCGCTGGGCGTGTCCGAGCGGACCGTGGGTACACGTTTGCGTCAGGCCGGCGAGAGATTGCGCGCGGTACTCCAACCGTCCTTCTCACTTGACGCCGCTCCAGCGTTTCCTTCAGACCAACGTGAGCTCTATGCCGAAGACTGA
PROTEIN sequence
Length: 187
EAYEPGSREDFDRLYRTAYPRVYRTLAAILGDREAAEDCVQDAFVQAFQAWKRWRPDAPAEAWVHRIAVNRAISYRRSAKLRQIGEVVRRLGRPVHPADPADIAAQGDLLTALRSLPPKLAAAIVLRHYHGYNNREIAAALGVSERTVGTRLRQAGERLRAVLQPSFSLDAAPAFPSDQRELYAED*