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13_2_20cm_scaffold_584

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_584_1
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..563
DNA (561bp) protein (187aa)
RNA polymerase sigma-E factor n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTS9_9ACTO
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KJR11591.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
ECF subfamily RNA polymerase sigma-24 factor
13_2_20cm_scaffold_584_2
unknown

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comp(645..815)
DNA (171bp) protein (57aa)

This feature has no annotations

13_2_20cm_scaffold_584_3
unknown

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1140..1391
DNA (252bp) protein (84aa)

This feature has no annotations

13_2_20cm_scaffold_584_4
unknown

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1422..1715
DNA (294bp) protein (98aa)

This feature has no annotations

13_2_20cm_scaffold_584_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1712..2581)
DNA (870bp) protein (290aa)
formate dehydrogenase alpha subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
molybdopterin oxidoreductase Fe4S4 region id=14630536 bin=bin8_Chloro species=Nocardiopsis sp. CNS639 genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
nuoG2; NADH dehydrogenase I chain G
13_2_20cm_scaffold_584_6
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(2574..2969)
DNA (396bp) protein (132aa)
nuoF; putative respiratory chain oxidoreductase; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=CSP1_4_Chloroflexi
nuoF; putative respiratory chain oxidoreductase; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] id=14630535 bin=bin8_Chloro species=Streptomyces bingchenggensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
13_2_20cm_scaffold_584_7
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2923..4275)
DNA (1353bp) protein (451aa)
Putative NADH oxidoreductase (Quinone), F subunit n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8PMY9_STRVR
Putative NADH oxidoreductase (Quinone), F subunit {ECO:0000313|EMBL:ELS57885.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy
nuoF2; NADH dehydrogenase I chain F
13_2_20cm_scaffold_584_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(4309..5940)
DNA (1632bp) protein (544aa)
molybdopterin oxidoreductase; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=GWC2_RIF_CHLX_73_18_curated
nitrate reductase (EC:1.7.99.4)
Formate dehydrogenase id=4954719 bin=GWC2_Chloroflexi_73_18 species=Nocardiopsis dassonvillei genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_2_20cm_scaffold_584_9
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5971..6216)
DNA (246bp) protein (82aa)
fdhA; Formate dehydrogenase subunit alpha (EC:1.2.1.2)
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:AIG76260.1}; EC=1.2.1.2 {ECO:0000313|EMBL:AIG76260.1};; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amy
formate dehydrogenase n=1 Tax=Demetria terragena RepID=UPI00036BB9D1
13_2_20cm_scaffold_584_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6244..7431)
DNA (1188bp) protein (396aa)
aminotransferase (EC:2.6.1.-)
aspartate/tyrosine/aromatic aminotransferase id=24475222 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
aspartate/tyrosine/aromatic aminotransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_2_20cm_scaffold_584_11
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(7445..8950)
DNA (1506bp) protein (502aa)
Extracellular solute-binding protein family 5 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEG0_9CHLR
putative ABC transporter substrate binding protein Tax=RBG_16_Chloroflexi_57_9_curated
family 5 extracellular solute-binding protein
13_2_20cm_scaffold_584_12
unknown

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comp(9042..9299)
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_scaffold_584_13
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(9328..9942)
DNA (615bp) protein (205aa)
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Superoxide dismutase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WSQ9_KYRT2
13_2_20cm_scaffold_584_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9990..10739)
DNA (750bp) protein (250aa)
phosphoglycerate mutase (EC:5.4.2.1); K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_16_Actinobacteria_67_10_curated
phosphoglycerate mutase (EC:5.4.2.4)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase id=2797451 bin=GWF2_Syntrophobacterales_56_9 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
13_2_20cm_scaffold_584_15

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comp(10756..11547)
DNA (792bp) protein (264aa)
Triose-phosphate isomerase (EC:5.3.1.1)
Marine sediment metagenome DNA, contig: S06H3_S07153 {ECO:0000313|EMBL:GAI26396.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Triosephosphate isomerase id=3025560 bin=GWC1_CPR2_39_9 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
13_2_20cm_scaffold_584_16
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11548..12768)
DNA (1221bp) protein (407aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=926569 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4J2_ANATU
13_2_20cm_scaffold_584_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(12711..13721)
DNA (1011bp) protein (337aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RBG_16_Acidobacteria_70_10_curated
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NJR1_9FIRM
13_2_20cm_scaffold_584_18
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13807..14682)
DNA (876bp) protein (292aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2K0_THEOJ
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Ther
13_2_20cm_scaffold_584_19
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14827..15801
DNA (975bp) protein (325aa)
Transketolase central region n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GCD9_CHLAD
transketolase
Transketolase central region {ECO:0000313|EMBL:ACL24983.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chlorof
13_2_20cm_scaffold_584_20
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15896..17017
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00037E03EB
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ADU50423.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacte
13_2_20cm_scaffold_584_21
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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17050..17274
DNA (225bp) protein (75aa)
UspA domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBR2_CONWI
UspA domain-containing protein; K03294 basic amino acid/polyamine antiporter, APA family Tax=RBG_13_Chloroflexi_52_14_curated
UspA domain-containing protein
Displaying 21 items

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