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13_2_20cm_scaffold_6825_17

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 15681..16232

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LD3_SYMTH similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 180.0
  • Bit_score: 156
  • Evalue 1.90e-35
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 180.0
  • Bit_score: 156
  • Evalue 5.50e-36
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD41513.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 180.0
  • Bit_score: 156
  • Evalue 2.70e-35

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Taxonomy

Symbiobacterium thermophilum → Symbiobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 552
GTGAGCTCGCTGCCATCCCGTGAGGATGAGCAGGCGCTGGTCGAGCGCGCGAAGCGCGACCCCAACGCATTCGGAGAGCTCTACGACCGCCACCTCGTGCAGATCTATCGCTTTGTGTGTTCAAGAGTGCGGGATCAGACGGTTGCAGAAGATGTCACCTCCGAGGTGTTCATGAAGGCGCTGAAGAGCATCGGGCGCTATCAGGACACCGGCAAGCCGTTCACGGCCTGGCTGTACCAGATCGCCGTGAACTCGGTGGCCGACCGCTACCGGGCGGCGCGGCCCGTCGAGGACATCGACGAGCAGCGTGACCTGGCGGTGGCCGGCCCGGCCCTGGAGGAGGTGGCGGCCCAGCGGGACGAGCTGCGCCGCATCTGGTCCGTCGTGGAGACGCTGCCCAAGCAGCAGCGAATCGCCATGGTGCTGAAGTTCCAGGAGGACATGAAGATCGAGGACATCGCGGTGGCGATGGGCAAGTCGCCGGGGGCGGTCAAGCTCCTGATCCACCGCGGGGTCACGAGGGTCCGGCAGGTCATGGGAGGCCTCGGGTGA
PROTEIN sequence
Length: 184
VSSLPSREDEQALVERAKRDPNAFGELYDRHLVQIYRFVCSRVRDQTVAEDVTSEVFMKALKSIGRYQDTGKPFTAWLYQIAVNSVADRYRAARPVEDIDEQRDLAVAGPALEEVAAQRDELRRIWSVVETLPKQQRIAMVLKFQEDMKIEDIAVAMGKSPGAVKLLIHRGVTRVRQVMGGLG*