ggKbase home page

13_2_20cm_scaffold_6825

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6825_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(826..1764)
DNA (939bp) protein (313aa)
asparaginase (EC:3.5.1.1)
Asparaginase {ECO:0000313|EMBL:ABU60446.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ABU60446.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseif
Asparaginase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NSA0_ROSCS rbh
13_2_20cm_scaffold_6825_2
unknown

Not on your lists

1982..2431
DNA (450bp) protein (150aa)

This feature has no annotations

13_2_20cm_scaffold_6825_3
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3209..3577
DNA (369bp) protein (123aa)
chitinase n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000361DD6F
Chitinase {ECO:0000313|EMBL:EYT82818.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
chitinase
13_2_20cm_scaffold_6825_4
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3660..4133
DNA (474bp) protein (158aa)
Hypothetical secreted protein n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HLD5_MYCMM
hypothetical protein
Hypothetical secreted protein {ECO:0000313|EMBL:ACC43667.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain
13_2_20cm_scaffold_6825_5
unknown

Not on your lists

comp(4138..4374)
DNA (237bp) protein (79aa)

This feature has no annotations

13_2_20cm_scaffold_6825_6
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

4538..6109
DNA (1572bp) protein (524aa)
multi-sensor signal transduction histidine kinase Tax=RBG_13_Chloroflexi_66_10_curated
13_2_20cm_scaffold_6825_7
unknown

Not on your lists

comp(6113..6319)
DNA (207bp) protein (69aa)

This feature has no annotations

13_2_20cm_scaffold_6825_8
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6354..7838)
DNA (1485bp) protein (495aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Desmospora sp. 8437 RepID=F5SIZ6_9BACL
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae;
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
13_2_20cm_scaffold_6825_9
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7807..8403)
DNA (597bp) protein (199aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] id=12493646 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
purN; phosphoribosylglycinamide formyltransferase, folate-dependent
13_2_20cm_scaffold_6825_10
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(8615..9511)
DNA (897bp) protein (299aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RBG_16_Chloroflexi_68_14_curated
phosphoribosylaminoimidazole synthetase n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003775017
phosphoribosylaminoimidazole synthetase
13_2_20cm_scaffold_6825_11
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9508..10956)
DNA (1449bp) protein (483aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI000368CE6C
amidophosphoribosyltransferase
13_2_20cm_scaffold_6825_12
unknown

Not on your lists

comp(10959..11192)
DNA (234bp) protein (78aa)

This feature has no annotations

13_2_20cm_scaffold_6825_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11195..11785)
DNA (591bp) protein (197aa)
purL; phosphoribosylformylglycinamidine synthase subunit PurL (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=24443593 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
phosphoribosylformylglycinamidine synthase
13_2_20cm_scaffold_6825_14

Not on your lists

comp(13339..14043)
DNA (705bp) protein (235aa)
phosphoribosylformylglycinamidine synthase 1 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJN3_RHOMR
Marine sediment metagenome DNA, contig: S01H1_L01385 {ECO:0000313|EMBL:GAF79265.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_2_20cm_scaffold_6825_15
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(14040..14303)
DNA (264bp) protein (88aa)
phosphoribosylformylglycinamidine synthase subunit PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Chloroflexi_68_14_curated
Phosphoribosylformylglycinamidine synthetase PurS n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG98_ANADE
phosphoribosylformylglycinamidine synthetase PurS
13_2_20cm_scaffold_6825_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14300..15208)
DNA (909bp) protein (303aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3B0_SPHTD
13_2_20cm_scaffold_6825_17
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15681..16232
DNA (552bp) protein (184aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LD3_SYMTH
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD41513.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacteriu
13_2_20cm_scaffold_6825_18
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16229..17020
DNA (792bp) protein (264aa)
Large extracellular alpha-helical protein-like protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USA2_ROSS1
large extracellular alpha-helical protein-like protein
Large extracellular alpha-helical protein-like protein {ECO:0000313|EMBL:ABQ89505.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Rose
Displaying 18 items

View Taxonomy