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13_2_20cm_scaffold_7564_17

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(10265..10807)

Top 3 Functional Annotations

Value Algorithm Source
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Nitrospirae_57_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 181.0
  • Bit_score: 156
  • Evalue 4.60e-35
RNA polymerase sigma factor id=4707989 bin=GWC2_Nitrospirae-rel_56_14 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 177.0
  • Bit_score: 155
  • Evalue 5.60e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 180.0
  • Bit_score: 135
  • Evalue 1.30e-29

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Taxonomy

GWC2_Nitrospirae_57_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 543
ATGGCGCCGTCGGACTACCAACTCTTGGACCGCTACGCGGCCGGCGACGACTCGGCCTTCGAGGAGCTGGTCACGCGCCATCAGAAGACCGTCTACGACCTGGCGCACCGAATGCTGGAGAACCATGCTGACGCGGCCGACATGGCGCAGAAGACGTTCGTGCAGGTCTTCCTCCATCATCGGTCCTTCAAGCGCGAGTCCAGCTTTCGGACCTGGGTCTATCAGATCTGCCTCAACCAATGCCGTAACGCGCTGCGCGATCGTGCCCGCCTGGCGCATCATGAGGATGTGGAAGGGCTGGCGCTTGCGGCCCCGCACGATACCTTTACGCAGGTCGCCGGATCCGAGCTGAAGGACCGTCTGGGGCAGGCGATCCGGACCCTGCCGGCGAGGCAGCGGGAAGCCCTGGTGCTGCGCGTCTATCACGACCACGCCTTTGCGGACATCGGGGTGATCATGAGCTGTTCCGAAGGGACCGCGAAGGCCAATTACCATCATGCGGTGGACAAGCTCCGCCGCGTCCTGATGGCGGGTGAGGGCTGA
PROTEIN sequence
Length: 181
MAPSDYQLLDRYAAGDDSAFEELVTRHQKTVYDLAHRMLENHADAADMAQKTFVQVFLHHRSFKRESSFRTWVYQICLNQCRNALRDRARLAHHEDVEGLALAAPHDTFTQVAGSELKDRLGQAIRTLPARQREALVLRVYHDHAFADIGVIMSCSEGTAKANYHHAVDKLRRVLMAGEG*