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OR_07182017_21_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07182017_21_scaffold_58_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3..338
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC89_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(339..2984)
DNA (2646bp) protein (882aa)
Alanine--tRNA ligase Tax=Niabella soli DSM 19437 RepID=H1NSL2_9SPHI
alanyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3142..4113
DNA (972bp) protein (324aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035F53D4
peptidase M23
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4484..5398)
DNA (915bp) protein (305aa)
Band 7 protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB91_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5450..5896)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB92_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02475.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07182017_21_scaffold_58_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5977..6573
DNA (597bp) protein (199aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035D96E6
HhH-GPD family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_7
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6772..7587
DNA (816bp) protein (272aa)
hypothetical protein Tax=Echinicola pacifica RepID=UPI00036C4AE4
Contig128, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74883.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
OR_07182017_21_scaffold_58_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

7584..8366
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I4A2K6_ORNRL
nucleotidyltransferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
OR_07182017_21_scaffold_58_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8411..10996)
DNA (2586bp) protein (862aa)
Phosphoenolpyruvate carboxylase, type 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK80_NIAKG
Phosphoenolpyruvate carboxylase, type 1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11253..11798
DNA (546bp) protein (182aa)
RNA polymerase sigma70 factor Tax=Segetibacter koreensis RepID=UPI00037BE707
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_11
unknown

Not on your lists

11826..12458
DNA (633bp) protein (211aa)

This feature has no annotations

OR_07182017_21_scaffold_58_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12470..12883
DNA (414bp) protein (138aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003776DB3
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12963..13712)
DNA (750bp) protein (250aa)
Beta-lactamase domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13729..15075)
DNA (1347bp) protein (449aa)
Cell cycle protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS7_NIAKG
cell cycle protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15077..17164)
DNA (2088bp) protein (696aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036078A2
peptidoglycan glycosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17194..17727)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000363C4FD
rod shape-determining protein MreD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17724..18452)
DNA (729bp) protein (243aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000377BA49
rod shape-determining protein MreC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18645..19670)
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS3_NIAKG
MreB/Mrl family cell shape determining protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19805..21097)
DNA (1293bp) protein (431aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035F2413
phosphoribosylamine--glycine ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21223..22719
DNA (1497bp) protein (499aa)
Amino acid/peptide transporter Tax=Niabella soli DSM 19437 RepID=H1NPZ8_9SPHI
peptide ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22787..24832
DNA (2046bp) protein (682aa)
Oligopeptide transporter, OPT family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD75_CHIPD
oligopeptide transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_22
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24946..26931
DNA (1986bp) protein (662aa)
Putative uncharacterized protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZQ5_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02600.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
OR_07182017_21_scaffold_58_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26941..28200
DNA (1260bp) protein (420aa)
hypothetical protein, partial Tax=Cytophagales str. B6 RepID=UPI0003B3655E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28243..29034
DNA (792bp) protein (264aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037A9DFE
membrane protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29206..31143)
DNA (1938bp) protein (646aa)
acetyl-CoA synthetase Tax=Segetibacter koreensis RepID=UPI000373590A
acetyl-coenzyme A synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_58_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31211..32797
DNA (1587bp) protein (529aa)
General substrate transporter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN2_NIAKG
MFS transporter {ECO:0000313|EMBL:KIC92187.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
general substrate transporter
OR_07182017_21_scaffold_58_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32831..33079
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92186.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
OR_07182017_21_scaffold_58_28
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33154..33858
DNA (705bp) protein (235aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000374B0BA
Gliding motility protein GldA {ECO:0000313|EMBL:KIC92182.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
gliding motility protein GldA
OR_07182017_21_scaffold_58_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

33862..34362
DNA (501bp) protein (167aa)
Putative acetyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD05_GEMAT
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:BAH40382.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
OR_07182017_21_scaffold_58_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

34421..35713
DNA (1293bp) protein (431aa)
eno; enolase (EC:4.2.1.11)
enolase Tax=Niabella aurantiaca RepID=UPI00035E227B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 74 in total

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