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OR_07242016_12_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_218_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

OR_07242016_12_scaffold_218_trna_2
unknown

Not on your lists

comp(356..430)
DNA (75bp)
transferRNA Cys
OR_07242016_12_scaffold_218_trna_1
unknown

Not on your lists

comp(510..583)
DNA (74bp)
transferRNA Arg
OR_07242016_12_scaffold_218_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(680..1459)
DNA (780bp) protein (260aa)
short-chain dehydrogenase Tax=Spirosoma panaciterrae RepID=UPI0003768CF5
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCH54540.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
short-chain dehydrogenase
OR_07242016_12_scaffold_218_3
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1529..2341)
DNA (813bp) protein (271aa)
Phytanoyl-CoA dioxygenase Tax=Fibrella aestuarina BUZ 2 RepID=I0K958_9BACT
Phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:CCH00661.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
OR_07242016_12_scaffold_218_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2508..3590
DNA (1083bp) protein (361aa)
Surface antigen (D15) Tax=Fibrella aestuarina BUZ 2 RepID=I0K959_9BACT
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AKD55128.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
OR_07242016_12_scaffold_218_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3623..4294)
DNA (672bp) protein (224aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00036ECC1B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38465.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
OR_07242016_12_scaffold_218_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4352..6256)
DNA (1905bp) protein (635aa)
Glucosamine-6-phosphate deaminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Q0_NIAKG
glucosamine-6-phosphate deaminase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6370..7968)
DNA (1599bp) protein (533aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000378469D
beta-N-acetylhexosaminidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8148..9641)
DNA (1494bp) protein (498aa)
pyruvate kinase Tax=Segetibacter koreensis RepID=UPI00037398B3
pyruvate kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9683..10669)
DNA (987bp) protein (329aa)
6-phosphofructokinase Tax=Segetibacter koreensis RepID=UPI0003826CEB
6-phosphofructokinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_10
unknown

Not on your lists

11125..11895
DNA (771bp) protein (257aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000366F147
OR_07242016_12_scaffold_218_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11913..12803)
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97362.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_218_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12859..14301)
DNA (1443bp) protein (481aa)
Arginine deiminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE0_NIAKG
arginine deiminase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14464..15153)
DNA (690bp) protein (230aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036AC896
crtA; spheroidene monooxygenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15239..16480
DNA (1242bp) protein (414aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Imidazolonepropionase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THV6_NIAKG
imidazolonepropionase
OR_07242016_12_scaffold_218_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16536..17585
DNA (1050bp) protein (350aa)
Arginase/agmatinase/formiminoglutamase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THV4_NIAKG
Arginase/agmatinase/formiminoglutamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17595..19580)
DNA (1986bp) protein (662aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000366B4BE
ABC transporter ATP-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19666..20268
DNA (603bp) protein (201aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000380B4C5
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20318..20605
DNA (288bp) protein (96aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D0A51
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20665..20826
DNA (162bp) protein (54aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D0A51
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20931..21134
DNA (204bp) protein (68aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D0A51
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22034..22234
DNA (201bp) protein (67aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D0A51
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22660..23826)
DNA (1167bp) protein (389aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000367065B
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23971..25908
DNA (1938bp) protein (646aa)
threonyl-tRNA synthetase Tax=Niabella aurantiaca RepID=UPI0003651842
threonyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25963..26538
DNA (576bp) protein (192aa)
Translation initiation factor IF-3 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU3_NIAKG
translation initiation factor 3 (bIF-3)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


26833..27033
DNA (201bp) protein (67aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037D3064
50S ribosomal protein L35
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


27100..27444
DNA (345bp) protein (115aa)
50S ribosomal protein L20 Tax=Segetibacter koreensis RepID=UPI000368756D
50S ribosomal protein L20
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27578..29008
DNA (1431bp) protein (477aa)
Orn/DAP/Arg decarboxylase 2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU0_NIAKG
Orn/DAP/Arg decarboxylase 2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_218_28
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29025..30197)
DNA (1173bp) protein (391aa)
Putative transmembrane glycosyltransferase Tax=Cyclobacterium qasimii M12-11B RepID=S7X5L1_9BACT
Putative transmembrane glycosyltransferase {ECO:0000313|EMBL:EPR71373.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
family 2 glycosyl transferase
Displaying items 1-30 of 34 in total

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