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OR_07242016_12_scaffold_237

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_237_1
unknown

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)

This feature has no annotations

OR_07242016_12_scaffold_237_2
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(123..2078)
DNA (1956bp) protein (652aa)
glycoside hydrolase (EC:3.2.1.-)
Glycoside hydrolase, family GH115 {ECO:0000313|EMBL:CAZ98756.1}; EC=3.2.1.- {ECO:0000313|EMBL:CAZ98756.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
Glycoside hydrolase, family GH115 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L4K6_ZOBGA
OR_07242016_12_scaffold_237_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2110..3621)
DNA (1512bp) protein (504aa)
Glycoside hydrolase family 28 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDM6_9SPHI
Glycoside hydrolase family 28 {ECO:0000313|EMBL:EHQ30715.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
endopolygalacturonase
OR_07242016_12_scaffold_237_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3642..5144)
DNA (1503bp) protein (501aa)
Glycoside hydrolase family 28 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDM6_9SPHI
Glycoside hydrolase family 28 {ECO:0000313|EMBL:EHQ30715.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
endopolygalacturonase
OR_07242016_12_scaffold_237_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5177..7354)
DNA (2178bp) protein (726aa)
Putative uncharacterized protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1U5_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:KFC58448.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
OR_07242016_12_scaffold_237_6
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7364..10120)
DNA (2757bp) protein (919aa)
Uncharacterized protein Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NAX0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEF90912.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
glycoside hydrolase family protein
OR_07242016_12_scaffold_237_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10141..12363)
DNA (2223bp) protein (741aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Glycoside hydrolase clan GH-D Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCG5_9SPHI
Alpha-galactosidase precursor
OR_07242016_12_scaffold_237_8
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12379..13884)
DNA (1506bp) protein (502aa)
hypothetical protein Tax=Rudanella lutea RepID=UPI000374AAD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK04437.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
OR_07242016_12_scaffold_237_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13896..16481)
DNA (2586bp) protein (862aa)
Putative uncharacterized protein Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITJ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99375.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
beta-glucosidase
OR_07242016_12_scaffold_237_10
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16478..18034)
DNA (1557bp) protein (519aa)
Glycoside hydrolase family 28 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1U4_PEDHD
glycoside hydrolase family protein
Glycoside hydrolase family 28 {ECO:0000313|EMBL:ACU05086.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
OR_07242016_12_scaffold_237_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18037..20751)
DNA (2715bp) protein (905aa)
Glycosyl hydrolase family 2, sugar binding domain protein Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5G1_9PORP
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EEC98343.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Mannosylglycoprotein endo-beta-mannosidase
OR_07242016_12_scaffold_237_12
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20767..22938)
DNA (2172bp) protein (724aa)
Putative uncharacterized protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1U5_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ACU05087.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
hypothetical protein
OR_07242016_12_scaffold_237_13
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23016..24641)
DNA (1626bp) protein (542aa)
Arylsulfatase {ECO:0000313|EMBL:AEI50555.1}; EC=3.1.6.1 {ECO:0000313|EMBL:AEI50555.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Arylsulfatase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMB7_RUNSL
arylsulfatase
OR_07242016_12_scaffold_237_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24679..25794)
DNA (1116bp) protein (372aa)
hypothetical protein Tax=Rudanella lutea RepID=UPI000368CAAF
Uncharacterized protein {ECO:0000313|EMBL:CCX78163.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
OR_07242016_12_scaffold_237_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25903..27459)
DNA (1557bp) protein (519aa)
Sulfatase Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1U6_PEDHD
sulfatase
Sulfatase {ECO:0000313|EMBL:ACU05088.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
OR_07242016_12_scaffold_237_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27456..28988)
DNA (1533bp) protein (511aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI000379FCC2
Arylsulfatase {ECO:0000313|EMBL:ERI72272.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
betC; choline-sulfatase
OR_07242016_12_scaffold_237_17
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28994..30427)
DNA (1434bp) protein (478aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036B70B4
N-acetylgalactosamine 6-sulfate sulfatase (GALNS) {ECO:0000313|EMBL:EMI45115.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
sulfatase
OR_07242016_12_scaffold_237_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30424..32010)
DNA (1587bp) protein (529aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI000379FCC2
sulfatase
Sulfatase {ECO:0000313|EMBL:ACT92058.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
OR_07242016_12_scaffold_237_19
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32046..34547)
DNA (2502bp) protein (834aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003663598
Heparinase II/III family protein {ECO:0000313|EMBL:EGJ72158.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein
OR_07242016_12_scaffold_237_20
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(34559..36079)
DNA (1521bp) protein (507aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037BDDF3
alkaline phosphatase
Tax=RBG_16_Planctomycetes_64_10_curated
OR_07242016_12_scaffold_237_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36120..37199)
DNA (1080bp) protein (360aa)
Transcriptional regulator, LacI family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB16_CHIPD
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACU59388.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_07242016_12_scaffold_237_22
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(37202..38584)
DNA (1383bp) protein (461aa)
Uncharacterized protein Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RMB1_ASTEC
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
OR_07242016_12_scaffold_237_23
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38602..40992)
DNA (2391bp) protein (797aa)
Alpha-1,2-mannosidase Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1U7_PEDHD
Alpha-1,2-mannosidase {ECO:0000313|EMBL:ACU05089.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
alpha-1,2-mannosidase
OR_07242016_12_scaffold_237_24
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(41215..43128)
DNA (1914bp) protein (638aa)
carbohydrate-binding protein SusD Tax=Spirosoma panaciterrae RepID=UPI000361F10C
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AFK04441.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
OR_07242016_12_scaffold_237_25
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43160..46165)
DNA (3006bp) protein (1002aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI000365DCE2
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI50546.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
TonB-dependent receptor plug
OR_07242016_12_scaffold_237_26
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

46416..47240
DNA (825bp) protein (275aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y721_9SPHI
Putative unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:KHJ37782.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
OR_07242016_12_scaffold_237_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

47326..47685
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH61_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 27 items

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