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OR_07242016_12_scaffold_376

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_376_1
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)
DNA mismatch endonuclease Vsr bin=GWD2_Bacteroidetes_40_43 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
putative very-short-patch-repair endonuclease
Tax=GWA2_Bacteroidetes_31_9b_curated
OR_07242016_12_scaffold_376_2
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(103..1173)
DNA (1071bp) protein (357aa)
Cytosine-specific methyltransferase bin=GWF2_Bacteroidetes_33_38 species=Galbibacter marinus genus=Galbibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
DNA-cytosine methyltransferase
Tax=GWF2_Bacteroidetes_33_38_curated
OR_07242016_12_scaffold_376_3
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1231..1956)
DNA (726bp) protein (242aa)
hypothetical protein Tax=Mastigocladopsis repens RepID=UPI00036CF0D4
Putative uncharacterized protein {ECO:0000313|EMBL:EDX75174.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
OR_07242016_12_scaffold_376_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2497..2727
DNA (231bp) protein (77aa)
hypothetical protein Tax=Synechococcus sp. PCC 7336 RepID=UPI00035E3E19
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_5
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2711..3040
DNA (330bp) protein (110aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGX7_9SPHI
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
OR_07242016_12_scaffold_376_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3218..3685)
DNA (468bp) protein (156aa)
Endoribonuclease L-PSP Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8C5_9SPHI
Endoribonuclease L-PSP {ECO:0000313|EMBL:KIC89412.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
translation initiation inhibitor
OR_07242016_12_scaffold_376_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3839..4774
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE08_NIAKG
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEW03556.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_376_8
unknown

Not on your lists

4827..5330
DNA (504bp) protein (168aa)

This feature has no annotations

OR_07242016_12_scaffold_376_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5364..6059)
DNA (696bp) protein (232aa)
Alpha/beta hydrolase fold protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE09_NIAKG
alpha/beta hydrolase fold protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6200..6988)
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE10_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7053..9041)
DNA (1989bp) protein (663aa)
potassium transporter Kup Tax=Segetibacter koreensis RepID=UPI00037C8C0F
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Low affinity potassium transport system protein kup
OR_07242016_12_scaffold_376_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9235..10767
DNA (1533bp) protein (511aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036FC872
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10771..11760
DNA (990bp) protein (330aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037C7F2F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11833..12492
DNA (660bp) protein (220aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036655F3
phosphoribosylformylglycinamidine synthase subunit I
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12543..13001
DNA (459bp) protein (153aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036ECA9C
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13015..14973
DNA (1959bp) protein (653aa)
Cytochrome c biogenesis protein transmembrane region Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSI1_CHIPD
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KIC92562.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
cytochrome C biogenesis protein transmembrane region
OR_07242016_12_scaffold_376_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15064..15645)
DNA (582bp) protein (194aa)
Putative uncharacterized protein Tax=Volvox carteri RepID=D8UMX6_VOLCA
RNA polymerase, sigma subunit, ECF family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_18
unknown

Not on your lists

15699..15956
DNA (258bp) protein (86aa)

This feature has no annotations

OR_07242016_12_scaffold_376_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15917..18766
DNA (2850bp) protein (950aa)
excinuclease ABC subunit A Tax=Segetibacter koreensis RepID=UPI000376A643
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_376_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19037..19459)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE21_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03569.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_376_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19831..21108)
DNA (1278bp) protein (426aa)
serine hydroxymethyltransferase Tax=Segetibacter koreensis RepID=UPI000375AEDA
glycine hydroxymethyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21336..22328
DNA (993bp) protein (331aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000370D26F
nucleotidyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_376_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22597..23553
DNA (957bp) protein (319aa)
2-nitropropane dioxygenase NPD Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PVA1_CHIPD
2-nitropropane dioxygenase {ECO:0000313|EMBL:KIC92571.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
2-nitropropane dioxygenase
Displaying 23 items

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