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OR_07242016_12_scaffold_440

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_440_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1..756)
DNA (756bp) protein (252aa)
NADH:ubiquinone oxidoreductase subunit H Tax=Segetibacter koreensis RepID=UPI00036DFD01
NADH dehydrogenase subunit H
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(771..1889)
DNA (1119bp) protein (373aa)
NADH dehydrogenase subunit G Tax=Segetibacter koreensis RepID=UPI000370DF41
NADH dehydrogenase subunit G
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_3
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(2157..2543)
DNA (387bp) protein (129aa)
Putative uncharacterized protein Tax=Volvox carteri RepID=D8UMW0_VOLCA
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ38940.1}; species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" source="Volvox carteri (Green alga).;"
S23 ribosomal protein
OR_07242016_12_scaffold_440_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2627..3982)
DNA (1356bp) protein (452aa)
NADH dehydrogenase {ECO:0000313|EMBL:KIC90542.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KIC90542.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NADH dehydrogenase subunit F Tax=Niabella soli DSM 19437 RepID=H1NTF2_9SPHI
NADH dehydrogenase
OR_07242016_12_scaffold_440_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4088..4588)
DNA (501bp) protein (167aa)
NADH dehydrogenase subunit E {ECO:0000313|EMBL:AEW03287.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEW03287.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH dehydrogenase subunit E Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRV2_NIAKG
NADH dehydrogenase subunit E
OR_07242016_12_scaffold_440_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4608..5837)
DNA (1230bp) protein (410aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase subunit D Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRV1_NIAKG
NADH dehydrogenase subunit D
OR_07242016_12_scaffold_440_7
unknown

Not on your lists

comp(5856..6047)
DNA (192bp) protein (64aa)

This feature has no annotations

OR_07242016_12_scaffold_440_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6117..6692)
DNA (576bp) protein (192aa)
NADH dehydrogenase subunit C Tax=Niabella aurantiaca RepID=UPI00037B9E0B
NADH dehydrogenase subunit C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6698..7288)
DNA (591bp) protein (197aa)
NADH-quinone oxidoreductase subunit B Tax=Niabella soli DSM 19437 RepID=H1NTR8_9SPHI
NADH dehydrogenase subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7403..7804)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000380636D
NADH-quinone oxidoreductase subunit A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7892..9715)
DNA (1824bp) protein (608aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D0272
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9742..10710)
DNA (969bp) protein (323aa)
Phosphate ABC transporter substrate-binding protein, PhoT family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRU5_NIAKG
phosphate ABC transporter substrate-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10667..10903)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRU4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03279.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_440_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11148..11603
DNA (456bp) protein (152aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003633D7D
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:AEW03278.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_440_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


11696..13060
DNA (1365bp) protein (455aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035EB245
histidyl-tRNA synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_16
unknown

Not on your lists

13100..13609
DNA (510bp) protein (170aa)

This feature has no annotations

OR_07242016_12_scaffold_440_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13643..14038)
DNA (396bp) protein (132aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14219..15412)
DNA (1194bp) protein (398aa)
Acetyl-CoA acetyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT6_NIAKG
acetyl-CoA acetyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_19
unknown

Not on your lists

comp(15673..15864)
DNA (192bp) protein (64aa)

This feature has no annotations

OR_07242016_12_scaffold_440_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16840..17955
DNA (1116bp) protein (372aa)
Probable dual-specificity RNA methyltransferase RlmN Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT3_NIAKG
23S rRNA m(2)A-2503 methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_440_21
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

18110..18673
DNA (564bp) protein (188aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_49_37 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
Displaying 21 items

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