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OR_07242016_12_scaffold_475

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_475_1
unknown

Not on your lists

1..111
DNA (111bp) protein (37aa)

This feature has no annotations

OR_07242016_12_scaffold_475_2
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

621..1463
DNA (843bp) protein (281aa)
hypothetical protein Tax=Cytophaga aurantiaca RepID=UPI00035E2E18
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:ABG60500.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
OR_07242016_12_scaffold_475_3
unknown

Not on your lists

1424..1582
DNA (159bp) protein (53aa)

This feature has no annotations

OR_07242016_12_scaffold_475_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1665..1937)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMC4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00906.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_475_5
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2667..3038)
DNA (372bp) protein (124aa)
S23 ribosomal protein Tax=Fulvivirga imtechensis AK7 RepID=L8JNC8_9BACT
30S ribosomal protein S23
Tax=GWA2_Bacteroidetes_31_9_curated
OR_07242016_12_scaffold_475_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3177..4523)
DNA (1347bp) protein (449aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000376960C
peptidase M50
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_475_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4569..5726)
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Segetibacter koreensis RepID=UPI000367CA70
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_475_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5801..7231)
DNA (1431bp) protein (477aa)
GH3 auxin-responsive promoter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T919_NIAKG
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEV96972.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_475_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


7518..7823
DNA (306bp) protein (102aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000362D1FD
50S ribosomal protein L21
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_475_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


7900..8166
DNA (267bp) protein (89aa)
50S ribosomal protein L27 Tax=Segetibacter koreensis RepID=UPI0003636766
50S ribosomal protein L27P
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_475_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8238..8432
DNA (195bp) protein (65aa)
Ribbon-helix-helix protein, copG family Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN82_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIL91267.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
OR_07242016_12_scaffold_475_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8526..10208
DNA (1683bp) protein (561aa)
PHP domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T913_NIAKG
PHP domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_475_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10205..10762)
DNA (558bp) protein (186aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000375CF62
hypothetical protein
OR_07242016_12_scaffold_475_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10743..13889)
DNA (3147bp) protein (1049aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000375CF62
integral membrane sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_475_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13886..14662)
DNA (777bp) protein (259aa)
MazG family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T911_NIAKG
MazG family protein
MazG family protein {ECO:0000313|EMBL:AEV96964.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_475_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14672..15790)
DNA (1119bp) protein (373aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003825E2D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96963.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_475_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15904..16737
DNA (834bp) protein (278aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000364480E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_475_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16766..17866)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000361EECB
response regulator receiver sensor signal transduction histidine kinase
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACU58813.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_07242016_12_scaffold_475_19
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17884..20100)
DNA (2217bp) protein (739aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000368AEBE
hypothetical protein
OR_07242016_12_scaffold_475_20
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20116..20754)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036CC804
protein-S isoprenylcysteine O-methyltransferase
Tax=BJP_08E140C01_Flavobacteriales_35_8
OR_07242016_12_scaffold_475_21
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20756..21529)
DNA (774bp) protein (258aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000373AECB
Uncharacterized protein {ECO:0000313|EMBL:EOR92878.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
OR_07242016_12_scaffold_475_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21636..22100
DNA (465bp) protein (155aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036524AE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACU58901.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_07242016_12_scaffold_475_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23056..23334
DNA (279bp) protein (93aa)
hypothetical protein Tax=Cytophagales str. B6 RepID=UPI0003B37E39
SelT/selW/selH selenoprotein {ECO:0000313|EMBL:KIC90718.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
OR_07242016_12_scaffold_475_24
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23345..23926
DNA (582bp) protein (194aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003618FC1
Uncharacterized protein {ECO:0000313|EMBL:ETZ24732.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
molybdopterin-guanine dinucleotide biosynthesis protein A
OR_07242016_12_scaffold_475_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23915..25387)
DNA (1473bp) protein (491aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000369F744
rubredoxin-type Fe(Cys)4 protein
Rubredoxin-type Fe(Cys)4 protein {ECO:0000313|EMBL:AEW01555.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_475_26
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25384..25839)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002D4C9F8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ55293.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain PCC 10605).;"
OR_07242016_12_scaffold_475_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25863..29084)
DNA (3222bp) protein (1074aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036F2DC1
bifunctional NAD(P)H-nitrite reductase/anaerobic dehydrogenase
Bifunctional NAD(P)H-nitrite reductase/anaerobic dehydrogenase {ECO:0000313|EMBL:AHF16325.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 27 items

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