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OR_07242016_12_scaffold_562

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_562_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(3..518)
DNA (516bp) protein (172aa)
50S ribosomal protein L2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMF4_NIAKG
50S ribosomal protein L2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_562_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(563..862)
DNA (300bp) protein (100aa)
50S ribosomal protein L23 Tax=Segetibacter koreensis RepID=UPI00037C2AA7
50S ribosomal protein L23
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_562_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(890..1528)
DNA (639bp) protein (213aa)
50S ribosomal protein L4 Tax=Segetibacter koreensis RepID=UPI0003719F00
50S ribosomal protein L4
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_562_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(1551..2138)
DNA (588bp) protein (196aa)
50S ribosomal protein L3 Tax=Segetibacter koreensis RepID=UPI00035E574B
50S ribosomal protein L3
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_562_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2534..2839)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNL4_NIAKG
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_562_6
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3245..5710
DNA (2466bp) protein (822aa)
O-antigen polymerase Tax=uncultured Flavobacteriia bacterium RepID=H6REP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFF13694.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
O-antigen polymerase
OR_07242016_12_scaffold_562_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(5899..8049)
DNA (2151bp) protein (717aa)
Elongation factor G Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNM0_NIAKG
translation elongation factor 2 (EF-2/EF-G)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_562_8

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comp(8275..8961)
DNA (687bp) protein (229aa)
fklB; FKBP family peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Marine sediment metagenome DNA, contig: S12H4_C01196 {ECO:0000313|EMBL:GAI72450.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Outer membrane protein MIP bin=GWC2_Bacteroidetes_40_22 species=unknown genus=unknown taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
OR_07242016_12_scaffold_562_9

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comp(9129..9821)
DNA (693bp) protein (231aa)
Marine sediment metagenome DNA, contig: S12H4_C01196 {ECO:0000313|EMBL:GAI72450.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Outer membrane protein MIP bin=GWC2_Bacteroidetes_40_22 species=unknown genus=unknown taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
Outer membrane protein MIP precursor (Macrophage infectivity potentiator) (Peptidyl-prolyl cis-trans isomerase)
OR_07242016_12_scaffold_562_10
GWA1_OP11_44_24, Amesbacteria, Microgenomates, Bacteria

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comp(9925..12663)
DNA (2739bp) protein (913aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYM2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT57107.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_44_24.;"
hypothetical protein
OR_07242016_12_scaffold_562_11
Micromonas pusilla, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

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comp(12842..15541)
DNA (2700bp) protein (900aa)
Predicted protein Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MU65_MICPC
Predicted protein {ECO:0000313|EMBL:EEH56275.1}; species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga).;"
cell wall anchor protein
Displaying 11 items

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