ggKbase home page

OR_07242016_12_scaffold_643

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_643_1
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

301..1263
DNA (963bp) protein (321aa)
Polysaccharide biosynthesis/export protein Tax=Bacteroides cellulosilyticus RepID=E2NKV2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB70703.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
capsule polysaccharide transporter
OR_07242016_12_scaffold_643_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1307..2074
DNA (768bp) protein (256aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003605CF0
TatD family hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_643_trna_1
unknown

Not on your lists

2177..2261
DNA (85bp)
transferRNA Ser
OR_07242016_12_scaffold_643_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2524..3126
DNA (603bp) protein (201aa)
Integrase family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THP7_NIAKG
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEV97475.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_643_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3123..3755
DNA (633bp) protein (211aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035CDEBD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEV97475.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_643_5
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3910..4212
DNA (303bp) protein (101aa)
DNA-binding helix-turn-helix protein Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUQ2_9SPHI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI93385.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
helix-turn-helix domain protein
OR_07242016_12_scaffold_643_6
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4213..6906
DNA (2694bp) protein (898aa)
hypothetical protein Tax=Rudanella lutea RepID=UPI0003658AFA
Histidinol phosphatase {ECO:0000313|EMBL:KGO32872.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
hypothetical protein
OR_07242016_12_scaffold_643_7
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6894..8111
DNA (1218bp) protein (406aa)
Uncharacterized protein Tax=Sporomusa ovata DSM 2662 RepID=T0JVW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB26418.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
AAA ATPase
OR_07242016_12_scaffold_643_8
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(8211..9374)
DNA (1164bp) protein (388aa)
HNH endonuclease Tax=Cytophaga aurantiaca RepID=UPI000375E87C
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
OR_07242016_12_scaffold_643_9
Streptococcus parasanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9375..10058)
DNA (684bp) protein (228aa)
Modification methylase EcoRI Tax=gamma proteobacterium IMCC1989 RepID=F3LDZ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJU88513.1}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus parasanguinis.;"
adenine-specific DNA-methyltransferase
OR_07242016_12_scaffold_643_10
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10197..11852
DNA (1656bp) protein (552aa)
Uncharacterized protein Tax=Arthrobotrys oligospora (strain ATCC 24927 / CBS 115.81 / DSM 1491) RepID=G1X7L0_ARTOA
Uncharacterized protein {ECO:0000313|EMBL:KFF14132.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
OR_07242016_12_scaffold_643_11
unknown

Not on your lists

11861..12448
DNA (588bp) protein (196aa)

This feature has no annotations

OR_07242016_12_scaffold_643_12
unknown

Not on your lists

13534..13668
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 13 items

View Taxonomy