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OR_08142018_2_5m_0_1um_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_53_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..223)
DNA (222bp) protein (74aa)
DNA topoisomerase {ECO:0000313|EMBL:EEI90705.1}; EC=5.99.1.2 {ECO:0000313|EMBL:EEI90705.1};; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
DNA topoisomerase n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G215_9SPHI
DNA topoisomerase III
OR_08142018_2_5m_0_1um_scaffold_53_2
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(227..1693)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZV5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO08673.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
uncharacterized protein
OR_08142018_2_5m_0_1um_scaffold_53_3
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1796..2086)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZV4_9FLAO
Excisionase {ECO:0000313|EMBL:KGO11348.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
uncharacterized protein
OR_08142018_2_5m_0_1um_scaffold_53_4
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2098..2451)
DNA (354bp) protein (118aa)
DNA-binding protein n=1 Tax=Empedobacter brevis RepID=UPI000370A151
Uncharacterized protein {ECO:0000313|EMBL:GAE65848.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_53_5
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2703..3548)
DNA (846bp) protein (282aa)
RteC protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0J5_9FLAO
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54398.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
regulatory protein RteC family protein
OR_08142018_2_5m_0_1um_scaffold_53_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3942..4814)
DNA (873bp) protein (291aa)
succinyl-CoA synthetase subsunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00035D2D0D
succinyl-CoA synthetase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_53_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4969..7362
DNA (2394bp) protein (798aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAA2_NIAKG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEV97049.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_08142018_2_5m_0_1um_scaffold_53_8
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7359..7991)
DNA (633bp) protein (211aa)
biopolymer transporter TonB n=1 Tax=Prevotella nanceiensis RepID=UPI0003622852
Uncharacterized protein {ECO:0000313|EMBL:KJF41807.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
energy transducer TonB
OR_08142018_2_5m_0_1um_scaffold_53_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8003..8761)
DNA (759bp) protein (253aa)
Mammalian cell entry related domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRY9_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC94130.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_53_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8766..9494)
DNA (729bp) protein (243aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG71_9SPHI
Organic solvent ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC91372.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ABC transporter
OR_08142018_2_5m_0_1um_scaffold_53_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9502..10284)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371E117
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60781.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_08142018_2_5m_0_1um_scaffold_53_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10526..11983
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DE7F8
Chemotaxis protein CheY {ECO:0000313|EMBL:KIC90867.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
two component, sigma54 specific, transcriptional regulator, Fis family
OR_08142018_2_5m_0_1um_scaffold_53_13
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11980..16527
DNA (4548bp) protein (1516aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000300EF49
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22795.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_53_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16527..18824
DNA (2298bp) protein (766aa)
Surface antigen (D15) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBV7_NIAKG
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEV98239.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_08142018_2_5m_0_1um_scaffold_53_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18826..19887)
DNA (1062bp) protein (354aa)
Ribonuclease BN n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNY9_NIAKG
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:AEW02074.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_08142018_2_5m_0_1um_scaffold_53_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19920..20510
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382478E
LemA family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_53_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20520..20981
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000366021B
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_53_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20982..21791
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB32_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_53_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21803..22606
DNA (804bp) protein (268aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_53_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22652..25108)
DNA (2457bp) protein (819aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB30_NIAKG
Peptidase M1 membrane alanine aminopeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_53_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25149..25691
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364C960
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_53_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25695..26426
DNA (732bp) protein (244aa)
tRNA pseudouridine synthase A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB28_NIAKG
tRNA pseudouridine synthase A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_53_16S_1
unknown

Not on your lists

26979..28505
DNA (1527bp)
16S ribosomal RNA (16S rRNA)
OR_08142018_2_5m_0_1um_scaffold_53_trna_1
unknown

Not on your lists

28592..28665
DNA (74bp)
transferRNA Ile
OR_08142018_2_5m_0_1um_scaffold_53_trna_2
unknown

Not on your lists

28756..28829
DNA (74bp)
transferRNA Ala
OR_08142018_2_5m_0_1um_scaffold_53_23
unknown

Not on your lists

comp(32070..32171)
DNA (102bp) protein (34aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_53_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32168..32512)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3UAP2_CROAH
Uncharacterized protein {ECO:0000313|EMBL:KIC94366.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_53_16S_2
unknown

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33259..34785
DNA (1527bp)
16S ribosomal RNA (16S rRNA)
OR_08142018_2_5m_0_1um_scaffold_53_trna_3
unknown

Not on your lists

34872..34945
DNA (74bp)
transferRNA Ile
OR_08142018_2_5m_0_1um_scaffold_53_trna_4
unknown

Not on your lists

35036..35109
DNA (74bp)
transferRNA Ala
Displaying items 1-30 of 138 in total

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