ggKbase home page

OR_07112018_10m_0_1um_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 311 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_10_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

51..842
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV0_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(843..1517)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMV2_CHIPD
LuxR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1525..1893)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Cardinium endosymbiont cEper1 of Encarsia pergandiella RepID=K0P5W2_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1975..3123)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B42A1
2-keto-4-methylthiobutyrate aminotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3134..4438)
DNA (1305bp) protein (435aa)
Outer membrane efflux protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHA9_RUNSL
outer membrane efflux protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4496..5212)
DNA (717bp) protein (239aa)
Uridylate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7K0_NIAKG
uridylate kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5305..6141)
DNA (837bp) protein (279aa)
Elongation factor Ts n=1 Tax=Niabella soli DSM 19437 RepID=H1NQU8_9SPHI
elongation factor Ts
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(6175..7077)
DNA (903bp) protein (301aa)
30S ribosomal protein S2 n=1 Tax=Segetibacter koreensis RepID=UPI00035DEB64
30S ribosomal protein S2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(7135..7524)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=1 Tax=Segetibacter koreensis RepID=UPI000376B685
30S ribosomal protein S9
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(7567..8010)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Segetibacter koreensis RepID=UPI000375B0E6
50S ribosomal protein L13
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8199..9296
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C9823
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9297..10271)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003627C7F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10255..11403)
DNA (1149bp) protein (383aa)
crtY; Lycopene cyclase (EC:1.14.-.-)
Lycopene cyclase n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L580_ZOBGA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11464..12201)
DNA (738bp) protein (246aa)
Proteorhodopsin n=1 Tax=Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) RepID=L7W6K7_NONDD
proteorhodopsin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12437..13180)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B4F66
DNA replication and repair protein RecO
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13190..13984)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D68E7
fatty acid desaturase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(14072..15124)
DNA (1053bp) protein (351aa)
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00035EBBA8
phenylalanyl-tRNA synthetase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15206..15949
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003670B82
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15956..17263
DNA (1308bp) protein (436aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG1_NIAKG
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17260..18453
DNA (1194bp) protein (398aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18501..21755)
DNA (3255bp) protein (1085aa)
Peptidase S41 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBB8_RUNSL
peptidase S41
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21792..22505
DNA (714bp) protein (238aa)
Allophanate hydrolase, subunit 1 id=4180263 bin=GWF2_Lentisphaerae_38_69 species=Thermococcus sibiricus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22509..23489
DNA (981bp) protein (327aa)
Urea amidolyase related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T833_NIAKG
urea amidolyase-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23449..24219
DNA (771bp) protein (257aa)
UPF0271 protein Emtol_0422 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPH3_EMTOG
UPF0271 protein ybgL
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24219..25418
DNA (1200bp) protein (400aa)
membrane protein n=1 Tax=Paenisporosarcina sp. TG-14 RepID=UPI0002FB5BA4
natural resistance-associated macrophage protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25440..26480)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372EB8C
tRNA 2-selenouridine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26519..27010
DNA (492bp) protein (164aa)
Putative phosphohistidine phosphatase, SixA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W0_NIAKG
putative phosphohistidine phosphatase, SixA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26997..27893)
DNA (897bp) protein (299aa)
Putative DMT superfamily transporter inner membrane protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N623_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27890..28978)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361340A
glycosyl transferase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_10_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29160..29399
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V7_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 311 in total

View Taxonomy