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OR_07232018_dam_0_1um_scaffold_248

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_248_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..302
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP50_THIA3
hypothetical protein; putative exported protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ90328.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_248_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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547..4191
DNA (3645bp) protein (1215aa)
Putative Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:CAZ90327.1}; EC=1.2.7.8 {ECO:0000313|EMBL:CAZ90327.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
putative Indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Putative Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP49_THIA3
OR_07232018_dam_0_1um_scaffold_248_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4218..4550
DNA (333bp) protein (111aa)
Putative zinc metallopeptidase ypfJ n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP48_THIA3
putative zinc metallopeptidase ypfJ
Uncharacterized protein {ECO:0000313|EMBL:ADG32464.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_248_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4554..4886
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X035_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32463.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_248_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5503..6762
DNA (1260bp) protein (420aa)
Gluconate 2-dehydrogenase cytochrome c subunit {ECO:0000313|EMBL:CDW93487.1}; EC=1.1.99.3 {ECO:0000313|EMBL:CDW93487.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Gluconate 2-dehydrogenase cytochrome c subunit precursor (GADH cytochrome c subunit) (GA 2-DH cytochrome c subunit) (EC:1.1.99.3)
Gluconate 2-dehydrogenase cytochrome c subunit (GADH cytochrome c subunit) (GA 2-DH cytochrome c subunit) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP46_THIA3
OR_07232018_dam_0_1um_scaffold_248_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6793..6939
DNA (147bp) protein (49aa)
Putative Drug resistance transporter, Bcr/CflA family n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP45_THIA3
putative Drug resistance transporter, Bcr/CflA family
Putative Drug resistance transporter, Bcr/CflA family {ECO:0000313|EMBL:CAZ90323.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_248_7
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6949..7827
DNA (879bp) protein (293aa)
Putative Drug resistance transporter, Bcr/CflA family n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP45_THIA3
Putative Drug resistance transporter, Bcr/CflA family {ECO:0000313|EMBL:CDW93488.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Drug resistance transporter, Bcr/CflA family
OR_07232018_dam_0_1um_scaffold_248_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7834..8421)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CP44_THIA3
conserved hypothetical protein, putative CBS domain
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ADG32460.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_248_9
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8556..10856)
DNA (2301bp) protein (767aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Primosomal protein N' n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X031_THIK1
primosomal protein N'
OR_07232018_dam_0_1um_scaffold_248_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11258..12349)
DNA (1092bp) protein (364aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X030_THIK1
OR_07232018_dam_0_1um_scaffold_248_11
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12469..12651
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CP40_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW93493.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein; putative membrane protein
OR_07232018_dam_0_1um_scaffold_248_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12667..13422)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X027_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32455.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_248_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13528..14445
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP38_THIA3
conserved hypothetical protein; putative membrane protein yedI
Uncharacterized protein {ECO:0000313|EMBL:CAZ90316.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_248_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14465..14701)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP37_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW93496.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
OR_07232018_dam_0_1um_scaffold_248_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14799..16043)
DNA (1245bp) protein (415aa)
Putative membrane-bound lytic murein transglycosylase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP36_THIA3
Putative membrane-bound lytic murein transglycosylase
Putative membrane-bound lytic murein transglycosylase {ECO:0000313|EMBL:CAZ90314.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_248_16
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16055..18178)
DNA (2124bp) protein (708aa)
Putative site-specific recombinase Gcr n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP35_THIA3
Putative site-specific recombinase Gcr {ECO:0000313|EMBL:CAZ90313.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
putative site-specific recombinase Gcr
OR_07232018_dam_0_1um_scaffold_248_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18178..18552)
DNA (375bp) protein (125aa)
Protein ApaG n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP34_THIA3
apaG; protein ApaG
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_248_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18681..19379
DNA (699bp) protein (233aa)
rpe; Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Ribulose-phosphate 3-epimerase n=2 Tax=Thiomonas RepID=D5X021_THIK1
OR_07232018_dam_0_1um_scaffold_248_19
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19379..20077
DNA (699bp) protein (233aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Phosphoglycolate phosphatase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X020_THIK1
phosphoglycolate phosphatase
OR_07232018_dam_0_1um_scaffold_248_20
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20178..20750)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP31_THIA3
conserved hypothetical protein; putative signal peptide
Uncharacterized protein {ECO:0000313|EMBL:CAZ90309.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_248_21
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20898..21521)
DNA (624bp) protein (208aa)
Putative Chalcone isomerase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP30_THIA3
putative Chalcone isomerase
Putative Chalcone isomerase {ECO:0000313|EMBL:CAZ90308.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_248_22
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21634..22098
DNA (465bp) protein (155aa)
Thioesterase superfamily protein n=2 Tax=Thiomonas RepID=D5X017_THIK1
putative thioesterase
Thioesterase superfamily protein {ECO:0000313|EMBL:ADG32445.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_248_23

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22391..23890
DNA (1500bp) protein (500aa)
Anthranilate synthase component 1 {ECO:0000313|EMBL:CBH98684.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CBH98684.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component 1 n=1 Tax=mine drainage metagenome RepID=E6PUS7_9ZZZZ
OR_07232018_dam_0_1um_scaffold_248_24
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23935..24525
DNA (591bp) protein (197aa)
Aminodeoxychorismate synthase, subunit II {ECO:0000313|EMBL:CDW93506.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CDW93506.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Glutamine amidotransferase of anthranilate synthase n=2 Tax=Thiomonas RepID=D5X015_THIK1
glutamine amidotransferase of anthranilate synthase
OR_07232018_dam_0_1um_scaffold_248_25
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24512..25561
DNA (1050bp) protein (350aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Anthranilate phosphoribosyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X014_THIK1
OR_07232018_dam_0_1um_scaffold_248_26
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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25646..26434
DNA (789bp) protein (263aa)
trpC; indole-3-glycerol phosphate synthase (IGPS) (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP25_THIA3
OR_07232018_dam_0_1um_scaffold_248_trna_1
unknown

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26499..26581
DNA (83bp)
transferRNA Tyr
OR_07232018_dam_0_1um_scaffold_248_trna_2
unknown

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26748..26818
DNA (71bp)
transferRNA Gly
OR_07232018_dam_0_1um_scaffold_248_trna_3
unknown

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26880..26951
DNA (72bp)
transferRNA Thr
OR_07232018_dam_0_1um_scaffold_248_27
Candidatus Kinetoplastibacterium oncopeltii, Kinetoplastibacterium, Betaproteobacteria, Proteobacteria, Bacteria

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26995..27132
DNA (138bp) protein (46aa)
elongation factor EF-Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Thiobacillus cuprina RepID=EFTU_THICU
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1208920 species="Bacteria; Proteobacteria; Betaproteobacteria; Kinetoplastibacterium.;" source="Candidatus Kinetoplastibacterium oncopeltii TCC290E.;"
Displaying 30 items

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