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OR_08082017_2m_0_2um_scaffold_2739

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08082017_2m_0_2um_scaffold_2739_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1305
-----------------
DNA (1305bp)
protein (435aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CDE84
Uncharacterized protein {ECO:0000313|EMBL:KGI77543.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
type I phosphodiesterase/nucleotide pyrophosphatase
OR_08082017_2m_0_2um_scaffold_2739_2
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1480..2658)
-----------------
DNA (1179bp)
protein (393aa)
Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain {ECO:0000313|EMBL:KDE39056.1}; EC=1.8.2.- {ECO:0000313|EMBL:KDE39056.1};; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
cytochrome C n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037EF08B
fccB-2; sulfide dehydrogenase, flavoprotein subunit
OR_08082017_2m_0_2um_scaffold_2739_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2697..3044)
-----------------
DNA (348bp)
protein (116aa)
Cytochrome c, class I n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0IYI3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETW93860.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
sulfide dehydrogenase
OR_08082017_2m_0_2um_scaffold_2739_4
unknown

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comp(3715..4014)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

OR_08082017_2m_0_2um_scaffold_2739_5
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3998..5779)
-----------------
DNA (1782bp)
protein (594aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GU90_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL71373.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
OR_08082017_2m_0_2um_scaffold_2739_6
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(5983..6576)
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein n=1 Tax=Vibrio breoganii RepID=UPI0002F9EC20
Uncharacterized protein {ECO:0000313|EMBL:EIF51257.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
OR_08082017_2m_0_2um_scaffold_2739_7
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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6888..7622
-----------------
DNA (735bp)
protein (245aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E1F03
cAMP-binding protein {ECO:0000313|EMBL:KHF25577.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
Crp/Fnr family transcriptional regulator
OR_08082017_2m_0_2um_scaffold_2739_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7799..8065)
-----------------
DNA (267bp)
protein (89aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWP2_HALNC
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACX95039.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_2739_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8422..9603
-----------------
DNA (1182bp)
protein (394aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:ACX95040.1}; EC=6.3.2.5 {ECO:0000313|EMBL:ACX95040.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWP3_HALNC
OR_08082017_2m_0_2um_scaffold_2739_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9606..10061
-----------------
DNA (456bp)
protein (152aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWP4_HALNC
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
OR_08082017_2m_0_2um_scaffold_2739_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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10115..10999
-----------------
DNA (885bp)
protein (295aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Acetylglutamate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWP5_HALNC
OR_08082017_2m_0_2um_scaffold_2739_12
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11158..11535)
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein
Uncharacterized protein id=2046632 bin=GWB2_Desulfobacterales_56_26 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
OR_08082017_2m_0_2um_scaffold_2739_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11814..12092
-----------------
DNA (279bp)
protein (93aa)
Protein required for attachment to host cells n=1 Tax=Rhodanobacter denitrificans RepID=M4ND22_9GAMM
protein required for attachment to host cells
Protein required for attachment to host cells {ECO:0000313|EMBL:AGG87737.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
OR_08082017_2m_0_2um_scaffold_2739_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12271..13737)
-----------------
DNA (1467bp)
protein (489aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWW3_HALNC
hypothetical protein
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACX97083.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_2739_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13753..15495)
-----------------
DNA (1743bp)
protein (581aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWW4_HALNC
multi-sensor signal transduction histidine kinase
OR_08082017_2m_0_2um_scaffold_2739_16
unknown

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15707..16039
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

OR_08082017_2m_0_2um_scaffold_2739_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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16125..16958
-----------------
DNA (834bp)
protein (278aa)
Inositol monophosphatase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWR3_HALNC
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:ACX95060.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_2739_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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17081..17653
-----------------
DNA (573bp)
protein (191aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWP6_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95043.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying 18 items

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