ggKbase home page

OR_08142018_10m_0_1um_scaffold_492

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_492_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..496)
DNA (495bp) protein (165aa)
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
F0F1 ATP synthase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00037AAA11
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(555..1427)
DNA (873bp) protein (291aa)
ATP synthase F0F1 subunit gamma (EC:3.6.3.14)
F0F1 ATP synthase subunit gamma n=1 Tax=Thiobacillus thioparus RepID=UPI0003781A2F
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1455..2996)
DNA (1542bp) protein (514aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha id=1324845 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3056..3592)
DNA (537bp) protein (179aa)
F-type H+-transporting ATP synthase, delta (OSCP) subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Thiobacillus thioparus RepID=UPI000371DC6F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_10m_0_1um_scaffold_492_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3596..4066)
DNA (471bp) protein (157aa)
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] id=12494014 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14)
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4132..5010)
DNA (879bp) protein (293aa)
ATP synthase F0F1 subunit A (EC:3.6.3.14)
ATP synthase subunit a id=1324841 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_492_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5112..5489)
DNA (378bp) protein (126aa)
Putative uncharacterized protein id=1324840 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5609..6460)
DNA (852bp) protein (284aa)
chromosome partitioning protein ParB n=1 Tax=Thiobacillus thioparus RepID=UPI00035CF4DE
chromosome segregation DNA-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6460..7245)
DNA (786bp) protein (262aa)
cobyric acid synthase CobQ n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CA080
chromosome segregation ATPase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7242..7883)
DNA (642bp) protein (214aa)
Ribosomal RNA small subunit methyltransferase G id=1324837 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
gidB; 16S rRNA methyltransferase GidB
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7880..9394)
DNA (1515bp) protein (505aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381BD5C
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_492_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9408..11552)
DNA (2145bp) protein (715aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037EDE47
ABC transporter ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_492_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11641..12351)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003664409
LamB/YcsF family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_492_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12348..13262)
DNA (915bp) protein (305aa)
allophanate hydrolase subunit 2 (EC:3.5.1.54)
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:AAZ98765.1}; EC=3.5.1.54 {ECO:0000313|EMBL:AAZ98765.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003718C23
OR_08142018_10m_0_1um_scaffold_492_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13259..13831)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037024F6
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14946..16598)
DNA (1653bp) protein (551aa)
RNA helicase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003630CE4
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AAZ98768.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_10m_0_1um_scaffold_492_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16940..18706)
DNA (1767bp) protein (589aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361EF1F
ABC transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18784..20124)
DNA (1341bp) protein (447aa)
tRNA modification GTPase MnmE id=1307773 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tRNA modification GTPase TrmE
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20096..21736)
DNA (1641bp) protein (547aa)
Membrane protein insertase YidC id=1307774 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protein translocase subunit yidC
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_20
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22047..22181)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 id=1307776 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L34
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_492_21
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22409..23752
DNA (1344bp) protein (448aa)
chromosomal replication initiator protein DnaA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036210E3
chromosome replication initiator DnaA
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_492_22
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23931..25037
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Thiobacillus denitrificans RepID=UPI0003684F16
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_492_23
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25096..26136
DNA (1041bp) protein (347aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMT4_THIDA
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_492_24
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26211..27116
DNA (906bp) protein (302aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Thiobacillus denitrificans RepID=UPI0003768F57
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_10m_0_1um_scaffold_492_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27323..28711
DNA (1389bp) protein (463aa)
GTPase HflX id=1325891 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
GTP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28754..29152)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370DB78
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29149..31725)
DNA (2577bp) protein (859aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I n=1 Tax=Thiobacillus denitrificans RepID=UPI00036324E2
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31745..32191)
DNA (447bp) protein (149aa)
Protein smg homolog id=1307783 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Smg protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_10m_0_1um_scaffold_492_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32196..33254)
DNA (1059bp) protein (353aa)
DNA-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F8EB0
SMF protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_10m_0_1um_scaffold_492_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33285..34550)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BC5F8
peptidoglycan-binding LysM-like protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 35 in total

View Taxonomy