ggKbase home page

07M_4_2014_scaffold_369

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_369_1
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(567..1697)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YT05_9BACT
glycosyl transferase family protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
07M_4_2014_scaffold_369_2
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1690..2091)
DNA (402bp) protein (134aa)
Putative Holliday junction resolvase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JT83_9BACT
Holliday junction resolvase-like protein
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
07M_4_2014_scaffold_369_3
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2095..2838)
DNA (744bp) protein (248aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=3460616 bin=GWC2_CPR2_39_35 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
Tax=BJP_IG2102_Syntrophobacterales_60_12
07M_4_2014_scaffold_369_4
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(2835..3524)
DNA (690bp) protein (230aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" sour
Adenylate kinase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE39_ARCPA
adenylate kinase
07M_4_2014_scaffold_369_5
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(3847..5952)
DNA (2106bp) protein (702aa)
Uncharacterized protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G3H1_CHLAD
hypothetical protein
Tax=CG_Elusi_01
07M_4_2014_scaffold_369_6
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists


comp(6295..7575)
DNA (1281bp) protein (427aa)
Protein translocase subunit SecY {ECO:0000313|EMBL:KKW15807.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Protein translocase subunit SecY id=1797347 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
preprotein translocase subunit SecY rbh
07M_4_2014_scaffold_369_7

Not on your lists


comp(7563..8060)
DNA (498bp) protein (166aa)
50S ribosomal protein L15 n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002F86C79
50S ribosomal protein L15 {ECO:0000313|EMBL:KKT06127.1}; TaxID=1618827 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_17.;"
50S ribosomal protein L15
07M_4_2014_scaffold_369_8
CG_CPR13_01, CG_CPR13, Bacteria

Not on your lists


comp(8062..8547)
DNA (486bp) protein (162aa)
Ribosomal protein S5 n=1 Tax=uncultured bacterium RepID=K2C608_9BACT
rpsE; 30S ribosomal subunit protein S5
Tax=CG_CPR13_01
07M_4_2014_scaffold_369_9
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(8566..8928)
DNA (363bp) protein (121aa)
50S ribosomal protein L18, partial n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F56E2
50S ribosomal protein L18
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
07M_4_2014_scaffold_369_10
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(8997..9548)
DNA (552bp) protein (184aa)
50S ribosomal protein L6 n=1 Tax=uncultured bacterium RepID=K2EYL5_9BACT
50S ribosomal protein L6
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
07M_4_2014_scaffold_369_11
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(9575..9985)
DNA (411bp) protein (137aa)
30S ribosomal protein S8 n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037D69F3
30S ribosomal protein S8
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
07M_4_2014_scaffold_369_12
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists


comp(10218..10760)
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=2 Tax=Thermoanaerobacter RepID=D3T4P3_THEIA
50S ribosomal protein L5 {ECO:0000313|EMBL:KKT34852.1}; TaxID=1618829 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_12.;"
50S ribosomal protein L5
07M_4_2014_scaffold_369_13
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(10766..11074)
DNA (309bp) protein (103aa)
50S ribosomal protein L24 n=1 Tax=uncultured bacterium RepID=K2C5Z0_9BACT
50S ribosomal protein L24
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
07M_4_2014_scaffold_369_14
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(11083..11454)
DNA (372bp) protein (124aa)
50S ribosomal protein L14 n=1 Tax=uncultured bacterium RepID=K2EYM1_9BACT
50S ribosomal protein L14
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
07M_4_2014_scaffold_369_15
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(11459..11707)
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B403BA
30S ribosomal protein S17
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
07M_4_2014_scaffold_369_16
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists


comp(11710..11916)
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=uncultured bacterium RepID=K2FUC6_9BACT
Tax=BJP_IG2158_OD1_28_51
07M_4_2014_scaffold_369_17

Not on your lists


comp(11919..12332)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=uncultured bacterium RepID=K2F9E3_9BACT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
50S ribosomal protein L16
07M_4_2014_scaffold_369_18
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(12345..13010)
DNA (666bp) protein (222aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=56496 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rpsC; 30S ribosomal protein S3
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
07M_4_2014_scaffold_369_19
RIFOXYB2_FULL_OD1_Uhrbacteria_57_15_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(13012..13542)
DNA (531bp) protein (177aa)
50S ribosomal protein L22 n=1 Tax=uncultured bacterium RepID=K2DI78_9BACT
rplV; 50S ribosomal protein L22
Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_57_15_curated
07M_4_2014_scaffold_369_20
R_OD1_Yanofskybacteria_44_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(13553..13909)
DNA (357bp) protein (119aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=96633 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
30S ribosomal protein S19
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_22_curated
07M_4_2014_scaffold_369_21
Parcubacteria bacterium GW2011_GWE1_43_8, Parcubacteria, Bacteria

Not on your lists


comp(13922..14773)
DNA (852bp) protein (284aa)
50S ribosomal protein L2 {ECO:0000313|EMBL:KKT21991.1}; TaxID=1618947 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE1_43_8.;"
hypothetical protein id=5801576 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
rplB; 50S ribosomal protein L2
07M_4_2014_scaffold_369_22
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(14779..15312)
DNA (534bp) protein (178aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=96631 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rplW; 50S ribosomal protein L23
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
07M_4_2014_scaffold_369_23
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(15317..15952)
DNA (636bp) protein (212aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=56955 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L4
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
07M_4_2014_scaffold_369_24
GWF2_OD1_45_11, Parcubacteria, Bacteria

Not on your lists


comp(15957..16625)
DNA (669bp) protein (223aa)
50S ribosomal protein L3 n=1 Tax=uncultured bacterium RepID=K2AZS0_9BACT
50S ribosomal protein L3 {ECO:0000313|EMBL:KKT92741.1}; TaxID=1618973 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;"
rplC; 50S ribosomal protein L3
07M_4_2014_scaffold_369_25
R_OD1_Uhrbacteria_47_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(16811..17188)
DNA (378bp) protein (126aa)
30S ribosomal protein S10 id=1797395 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S10
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_25_curated
07M_4_2014_scaffold_369_26
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(17270..18454)
DNA (1185bp) protein (395aa)
acp:A2cp1_2367 elongation factor Tu (EC:2.7.7.4) id=4848 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Elongation factor Tu {ECO:0000313|EMBL:KKW13585.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
tufA; elongation factor Tu
07M_4_2014_scaffold_369_27
unknown

Not on your lists

comp(18684..19262)
DNA (579bp) protein (193aa)

This feature has no annotations

07M_4_2014_scaffold_369_28
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19281..21365)
DNA (2085bp) protein (695aa)
elongation factor P n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B4CFE1
translation elongation factor G
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
07M_4_2014_scaffold_369_29
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(21371..21835)
DNA (465bp) protein (155aa)
30S ribosomal protein S7 id=1956438 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S7
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
07M_4_2014_scaffold_369_30
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists


comp(21845..22276)
DNA (432bp) protein (144aa)
30S ribosomal protein S12 n=1 Tax=uncultured bacterium RepID=K1Z0R0_9BACT
30S ribosomal protein S12 {ECO:0000313|EMBL:KKW13581.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
rpsL; 30S ribosomal protein S12
Displaying items 1-30 of 49 in total

View Taxonomy