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07M_4_2014_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_312_1
Peptostreptococcus stomatis, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..583
DNA (582bp) protein (194aa)
Transposase n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E1D6_9FIRM
Transposase {ECO:0000313|EMBL:EFM65295.1}; TaxID=596315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus stomatis DSM 17678.;"
transposase
07M_4_2014_scaffold_312_2
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(736..1914)
DNA (1179bp) protein (393aa)
Radical sam protein, putative id=4214125 bin=GWF2_Lentisphaerae_57_35 species=Thermoplasmatales archaeon SCGC AB-540-F20 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
MiaB family RNA modification protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
07M_4_2014_scaffold_312_3
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(2162..2488)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B42FC5
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
07M_4_2014_scaffold_312_4
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(2437..3162)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B42FC5
NAD-dependent epimerase/dehydratase
Tax=RBG_13_Chloroflexi_46_14_curated
07M_4_2014_scaffold_312_5
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3155..4024)
DNA (870bp) protein (290aa)
transketolase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B7637C
putative transketolase, C-terminal section
Tax=RBG_13_Chloroflexi_46_14_curated
07M_4_2014_scaffold_312_6
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(4008..4793)
DNA (786bp) protein (262aa)
transketolase (EC:2.2.1.1)
transketolase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B7B388 rbh
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
07M_4_2014_scaffold_312_7
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(4793..5551)
DNA (759bp) protein (253aa)
crotonobetainyl-CoA:carnitine CoA-transferase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B77FF5
CalS11
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
07M_4_2014_scaffold_312_8
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5548..6525)
DNA (978bp) protein (326aa)
fcl; GDP-L-fucose synthetase (EC:1.1.1.271)
putative nucleoside-diphosphate-sugar epimerases id=3930247 bin=GWF2_Nitrospirae_44_13 species=gamma proteobacterium SCGC AAA001-B15 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_9
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6536..7519)
DNA (984bp) protein (328aa)
GDP-mannose 4,6-dehydratase id=3930269 bin=GWF2_Nitrospirae_44_13 species=Fusobacterium ulcerans genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
putative GDP-mannose 4,6-dehydratase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_312_10
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7535..8473)
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase id=3930273 bin=GWF2_Nitrospirae_44_13 species=Arcobacter nitrofigilis genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
nad dependent epimerase/dehydratase family rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_312_11
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8601..9761)
DNA (1161bp) protein (387aa)
DegT/DnrJ/EryC1/StrS aminotransferase id=3930275 bin=GWF2_Nitrospirae_44_13 species=Arcobacter nitrofigilis genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
DegT/DnrJ/EryC1/StrS aminotransferase rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_312_12
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9758..10744)
DNA (987bp) protein (329aa)
GHMP kinase id=4749412 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter rbh
GHMP kinase rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_312_13
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11036..11545)
DNA (510bp) protein (170aa)
Transcriptional regulator, ArsR family id=3578836 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=Lacinutrix taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_312_14
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(11548..12300)
DNA (753bp) protein (251aa)
peptidase C1 n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034D9CCF rbh
peptidase C1
Tax=CG_Elusi_05
07M_4_2014_scaffold_312_15
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12510..13643)
DNA (1134bp) protein (378aa)
Glycosyl transferase group 1 id=3685228 bin=GWA2_Elusimicrobia_51_34 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
group 1 glycosyl transferase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_16
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13687..15309)
DNA (1623bp) protein (541aa)
Putative uncharacterized protein id=1985269 bin=GWD2_Deltaproteobacteria_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Bacterial membrane protein YfhO
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_17
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15502..16272)
DNA (771bp) protein (257aa)
Glycosyl transferase, family 2 n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TFG8_HELMI
family 2 glycosyl transferase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_18
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16307..18337)
DNA (2031bp) protein (677aa)
hypothetical protein id=15192190 bin=GWC2_NOV_55_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_19
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18334..20262)
DNA (1929bp) protein (643aa)
SLEI family protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=Q22AU5_TETTS
exopolysaccharide biosynthesis family protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_312_20
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20275..21582)
DNA (1308bp) protein (436aa)
Integral membrane protein MviN n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AA39_9FIRM
polymerase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_21
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21840..22454)
DNA (615bp) protein (205aa)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_22
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22455..24170)
DNA (1716bp) protein (572aa)
Type 4 fimbrial biogenesis protein PilQ id=4718617 bin=GWA2_Elusimicrobia_69_24 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia rbh
pilus assembly protein PilQ
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_23
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(24167..24661)
DNA (495bp) protein (165aa)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_24
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24673..25017)
DNA (345bp) protein (115aa)
Ribosomal S23 superfamily protein n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IHI5_PSYTT
ribosomal S23 superfamily protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
07M_4_2014_scaffold_312_25
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25053..25595)
DNA (543bp) protein (181aa)
pilus assembly protein PilO
pilO; type IV pilus biogenesis protein PilO; K02664 type IV pilus assembly protein PilO id=14425257 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_26
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25696..26259)
DNA (564bp) protein (188aa)
Type IV pilus assembly protein PilN id=4926055 bin=GWC2_Elusimicrobia_64_44 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_27
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(26256..27431)
DNA (1176bp) protein (392aa)
Type IV pilus biogenesis protein PilM id=4718613 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
pilM; type IV pilus biogenesis protein PilM
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_28
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(27572..29272)
DNA (1701bp) protein (567aa)
Small GTP-binding protein id=2486162 bin=GWC2_Clostridiales_40_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
small GTP-binding protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_29
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(29312..29542)
DNA (231bp) protein (77aa)
Ferrous iron transport protein A, putative n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z6E5_DEHE1
ferrous iron transport protein A
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_312_30
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(29536..30699)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D639_METSW rbh
hypothetical protein rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
Displaying items 1-30 of 31 in total

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