ggKbase home page

07M_4_2014_scaffold_480

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_480_1
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

521..3553
DNA (3033bp) protein (1011aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B39DF6
acriflavin resistance protein
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
07M_4_2014_scaffold_480_2
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

3680..4846
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z8K8_9BACT
hypothetical protein
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_480_3
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

5050..8190
DNA (3141bp) protein (1047aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XSD1_9BACT
Acriflavin resistance protein
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
07M_4_2014_scaffold_480_4
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

8330..9430
DNA (1101bp) protein (367aa)
TPR repeat-containing protein id=4315725 bin=GWC2_Elusimicrobia_51_8 species=uncultured bacterium URE12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_480_trna_1
unknown

Not on your lists

9571..9643
DNA (73bp)
transferRNA Ala
07M_4_2014_scaffold_480_5
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

Not on your lists

9977..10129
DNA (153bp) protein (51aa)
id=4113342 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
07M_4_2014_scaffold_480_6
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

10296..10865
DNA (570bp) protein (190aa)
Putative methyltransferase n=2 Tax=Thermoanaerobacter RepID=B0K1X5_THEPX
putative methyltransferase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_480_7
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

10862..11590
DNA (729bp) protein (243aa)
Acetylglutamate kinase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=ARGB_UNCTG
acetylglutamate kinase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_480_8
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11568..13250)
DNA (1683bp) protein (561aa)
recN; DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) id=7201983 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
recN; DNA repair protein RecN
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_480_9
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13308..14105)
DNA (798bp) protein (266aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase id=2205374 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_480_10
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14208..16391)
DNA (2184bp) protein (728aa)
DNA internalization-related competence protein ComEC/Rec2 n=5 Tax=Clostridium thermocellum RepID=A3DD12_CLOTH
DNA internalization-related competence protein ComEC/Rec2
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_480_11
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

16845..17300
DNA (456bp) protein (152aa)
Transcriptional repressor NrdR n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LT30_TEPAE
NrdR family transcriptional regulator
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_480_12
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

17424..17855
DNA (432bp) protein (144aa)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_480_13
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

17836..18456
DNA (621bp) protein (207aa)
Ribonucleoside-triphosphate reductase-like protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8Q3_9EURY
ribonucleoside-triphosphate reductase-like protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_480_14
Microgenomates bacterium GW2011_GWB1_44_8, Microgenomates, Bacteria

Not on your lists

18644..20365
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037FA29B rbh
Uncharacterized protein {ECO:0000313|EMBL:KKT77085.1}; TaxID=1618505 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_44_8.;"
hypothetical protein rbh
07M_4_2014_scaffold_480_15
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

20362..21306
DNA (945bp) protein (315aa)
gur:Gura_3967 hypothetical protein id=2922 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
phage antirepressor protein
Tax=BJP_IG2158_Nitrospirales_45_240
07M_4_2014_scaffold_480_16
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

21337..23724
DNA (2388bp) protein (796aa)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=planctomycete KSU-1 RepID=I3IIX4_9PLAN
ribonucleoside-triphosphate reductase class III catalytic subunit
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_480_17
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

24019..24447
DNA (429bp) protein (143aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Fusobacterium nucleatum RepID=D6BF05_FUSNU
deoxyuridine 5'-triphosphate nucleotidohydrolase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_480_18
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

24502..25110
DNA (609bp) protein (203aa)
Thymidylate synthase ThyX id=4058993 bin=GWF2_Planctomycete_41_51 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
thymidylate synthase ThyX
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
Displaying 19 items

View Taxonomy