ggKbase home page

07M_4_2014_scaffold_659

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_659_1
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(1..195)
DNA (195bp) protein (65aa)
Tax=CG_Elusi_05
07M_4_2014_scaffold_659_2
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(192..698)
DNA (507bp) protein (169aa)
Putative uncharacterized protein id=1759455 bin=GWB2_Elusimicrobium_63_22 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_659_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(973..1830)
DNA (858bp) protein (286aa)
Foldase protein PrsA {ECO:0000256|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Foldase protein PrsA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTL4_9CLOT
Foldase prsA
07M_4_2014_scaffold_659_4
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2265..3332)
DNA (1068bp) protein (356aa)
Uncharacterized protein involved in formation of curli polymers-like protein id=5014588 bin=GWA2_Elusimicrobia_56_46 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
curli production assembly/transport component CsgG
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_659_5
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3335..3976)
DNA (642bp) protein (214aa)
Uncharacterized conserved protein id=4904464 bin=GWA2_Elusi_like_61_42 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_659_6
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3978..4454)
DNA (477bp) protein (159aa)
Acetolactate synthase small subunit n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYS5_UNCTG
acetolactate synthase small subunit
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_659_7
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(4478..4681)
DNA (204bp) protein (68aa)
Tax=RBG_16_RIF03_38_10_curated
07M_4_2014_scaffold_659_8
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(4678..5592)
DNA (915bp) protein (305aa)
CfrBI restriction endonuclease n=1 Tax=Prevotella disiens JCM 6334 = ATCC 29426 RepID=U2J2E7_9BACT
putative type II restriction enzyme
Tax=CG_Omnitr_02
07M_4_2014_scaffold_659_9
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5589..7064)
DNA (1476bp) protein (492aa)
Putative type II DNA modification methylase id=3438923 bin=GWA2_CPR4_42_17 species=Capnocytophaga sp. oral taxon 380 genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
putative type II DNA modification methylase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
07M_4_2014_scaffold_659_10
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7169..8896)
DNA (1728bp) protein (576aa)
Acetolactate synthase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYS6_UNCTG rbh
acetolactate synthase large subunit rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_659_trna_1
unknown

Not on your lists

comp(8968..9039)
DNA (72bp)
transferRNA Pro
07M_4_2014_scaffold_659_11
unknown

Not on your lists

comp(9113..9229)
DNA (117bp) protein (39aa)

This feature has no annotations

07M_4_2014_scaffold_659_12
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9267..10232)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EDA7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG65940.1}; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. MB1.;"
07M_4_2014_scaffold_659_13
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(10240..11115)
DNA (876bp) protein (292aa)
DNA methylase n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037E41A6
DNA methylase N-4/N-6 domain-containing protein
Tax=CG_Omnitr_02
07M_4_2014_scaffold_659_14
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(11483..12835)
DNA (1353bp) protein (451aa)
phosphotransferase domain-containing protein; K07053 id=7201556 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
putative phosphatase, PHP family
Tax=RIFOXYC12_FULL_TA06_54_24_curated
07M_4_2014_scaffold_659_15
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12884..14071)
DNA (1188bp) protein (396aa)
acetate kinase n=1 Tax=Peptoniphilus lacrimalis RepID=UPI000372B750
acetate kinase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_659_16
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14368..15324)
DNA (957bp) protein (319aa)
acetyl-CoA synthase subunit delta n=1 Tax=Desulfurispora thermophila RepID=UPI000379FE11
CO dehydrogenase/acetyl-CoA synthase subunit delta
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_659_17
GWA2_OP3X_41_15_curated, OP3X, Bacteria

Not on your lists

comp(15394..17307)
DNA (1914bp) protein (638aa)
Ferredoxin id=4113582 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ferredoxin
Tax=GWA2_OP3X_41_15_curated
07M_4_2014_scaffold_659_18
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(17410..17598)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W343_9CYAN
hypothetical protein
Tax=CG_Elusi_02
07M_4_2014_scaffold_659_19
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17582..18712)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YCH7_9BACT rbh
putative ATPase (AAA+ superfamily)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_659_20
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18770..20083)
DNA (1314bp) protein (438aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI76_DESK7 rbh
CO dehydrogenase/acetyl-CoA synthase subunit delta rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_659_21
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(20120..20512)
DNA (393bp) protein (131aa)
HEPN domain protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C1Y5_THEGP
HEPN domain-containing protein
HEPN domain protein {ECO:0000313|EMBL:AEH23314.1}; TaxID=795359 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium geofontis (strain OPF15).;"
07M_4_2014_scaffold_659_22
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20509..20823)
DNA (315bp) protein (105aa)
DNA polymerase beta domain protein region id=1854861 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
DNA polymerase beta domain-containing protein region
Tax=GWE2_Bacteroidetes_42_39_curated
Displaying 23 items

View Taxonomy