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07M_4_2014_scaffold_700

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_700_1
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

170..2287
DNA (2118bp) protein (706aa)
ATP-dependent DNA helicase RecG id=4718566 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ATP-dependent DNA helicase RecG
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_2
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

2462..2941
DNA (480bp) protein (160aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LVL3_TEPAE
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_3
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

3079..4827
DNA (1749bp) protein (583aa)
Type IV-A pilus assembly ATPase PilB id=3690183 bin=GWA2_Elusimicrobia_69_24 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia rbh
type IV-A pilus assembly ATPase PilB
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_4
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

4926..5999
DNA (1074bp) protein (358aa)
Twitching motility protein PilT id=4349250 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
pilT; twitching motility protein PilT
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_5
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

5996..7222
DNA (1227bp) protein (409aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NQC5_9FIRM
TPR domain protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_6
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

7319..8545
DNA (1227bp) protein (409aa)
Type II secretion system F domain protein id=4904342 bin=GWA2_Elusi_like_61_42 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi rbh
pilus assembly protein PilC
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_7
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

8895..9380
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=2187993 bin=GWA2_Elusimicrobia_56_46 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
putative fimbrial protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_8
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

9717..10457
DNA (741bp) protein (247aa)
prepilin peptidase (EC:3.4.23.43)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003653069
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_700_9
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists


comp(10419..11258)
DNA (840bp) protein (280aa)
dimethyladenosine transferase (EC:2.1.1.48)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=RSMA_CLOBM
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_700_10
unknown

Not on your lists

comp(11224..11346)
DNA (123bp) protein (41aa)

This feature has no annotations

07M_4_2014_scaffold_700_11
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11343..11939)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037633F1
mcrA; Restriction endonuclease, McrA/HNH family
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_12
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12021..12863)
DNA (843bp) protein (281aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase id=4039552 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_13
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12928..13989)
DNA (1062bp) protein (354aa)
PpiC-type peptidyl-prolyl cis-trans isomerase id=4910147 bin=GWC2_Elusimicrobia_51_8 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_14
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13986..14972)
DNA (987bp) protein (329aa)
PpiC-type peptidyl-prolyl cis-trans isomerase id=2810965 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_700_15
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15004..17964)
DNA (2961bp) protein (987aa)
Transcription-repair-coupling factor n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H078_UNCTG rbh
transcription-repair coupling factor Mfd rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_700_16
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18028..19521)
DNA (1494bp) protein (498aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7Q9_CLOBO
RNA methyltransferase, TrmA family rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_700_17
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19692..19979)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5Z9_METEZ
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
Displaying 17 items

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