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bjp_ig2599_scaffold_4088

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_4088_1
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(378..1481)
DNA (1104bp) protein (368aa)
Protein of unknown function, DUF400 Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
Putative uncharacterized protein id=3068281 bin=GWA2_Elusimicrobia_51_34 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Protein of unknown function, DUF400
bjp_ig2599_scaffold_4088_2
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(1491..1934)
DNA (444bp) protein (148aa)
LPP20 lipoprotein Tax=CG_CP01_01
LPP20 lipoprotein id=2228698 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
bjp_ig2599_scaffold_4088_3
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2412..3050)
DNA (639bp) protein (213aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Putative uncharacterized protein id=4243272 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
bjp_ig2599_scaffold_4088_4
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

3471..4163
DNA (693bp) protein (231aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI0003773196
hypothetical protein Tax=CG_CP01_01
hypothetical protein
bjp_ig2599_scaffold_4088_5
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(4845..5444)
DNA (600bp) protein (200aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29) Tax=CG_CP01_01
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DIQ1_CLOTH
bjp_ig2599_scaffold_4088_6
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(5448..7175)
DNA (1728bp) protein (576aa)
stage V sporulation protein D (EC:2.4.1.129); K08384 stage V sporulation protein D (sporulation-specific penicillin-binding protein) Tax=CG_CP01_01
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036BD992
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI
bjp_ig2599_scaffold_4088_trna_4
unknown

Not on your lists

comp(7234..7305)
DNA (72bp)
transferRNA
bjp_ig2599_scaffold_4088_trna_3
unknown

Not on your lists

comp(7356..7428)
DNA (73bp)
transferRNA
bjp_ig2599_scaffold_4088_trna_2
unknown

Not on your lists

comp(7497..7587)
DNA (91bp)
transferRNA
bjp_ig2599_scaffold_4088_7
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(7532..8053)
DNA (522bp) protein (174aa)
Putative deaminase n=1 Tax=planctomycete KSU-1 RepID=I3IPJ9_9PLAN
CumB; cytosine/adenosine deaminases Tax=CG_CP01_01
zinc-binding CMP/dCMP deaminase protein
bjp_ig2599_scaffold_4088_trna_1
unknown

Not on your lists

comp(8090..8163)
DNA (74bp)
transferRNA
bjp_ig2599_scaffold_4088_8
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(8296..8802)
DNA (507bp) protein (169aa)
hypothetical protein; K07043 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Glr3535 protein id=4282168 bin=GWF2_OP3_43_52 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
metal-dependent hydrolase
bjp_ig2599_scaffold_4088_9
unknown

Not on your lists

8990..9097
DNA (108bp) protein (36aa)

This feature has no annotations

bjp_ig2599_scaffold_4088_10
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

9094..9741
DNA (648bp) protein (216aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=CG_CP01_01
siroheme synthase (EC:1.3.1.76)
Siroheme synthase id=4326317 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
bjp_ig2599_scaffold_4088_11
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

9738..10625
DNA (888bp) protein (296aa)
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=CG_CP01_01
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W2E6_9FIRM
bjp_ig2599_scaffold_4088_12
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

10683..11600
DNA (918bp) protein (306aa)
PfkB domain-containing protein Tax=CG_CP01_01
Adenosine kinase id=2233912 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good rbh
sugar kinase
bjp_ig2599_scaffold_4088_13
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11825..12076
DNA (252bp) protein (84aa)
hypothetical protein n=2 Tax=unclassified Zetaproteobacteria RepID=UPI00037B785B
Uncharacterized protein {ECO:0000313|EMBL:KFD41763.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
hypothetical protein
bjp_ig2599_scaffold_4088_14
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12097..12339
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIY8_DESAR
Uncharacterized protein {ECO:0000313|EMBL:KFD41764.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
hypothetical protein
bjp_ig2599_scaffold_4088_15
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

12491..14548
DNA (2058bp) protein (686aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] Tax=CG_CP01_01
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA31_THEID
bjp_ig2599_scaffold_4088_16
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

14597..15841
DNA (1245bp) protein (415aa)
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=CG_CP01_01
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] id=1251202 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria rbh
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
bjp_ig2599_scaffold_4088_17
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(15973..16728)
DNA (756bp) protein (252aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSB0_ARCVS
hypothetical protein Tax=CG_CP01_01
hypothetical protein
bjp_ig2599_scaffold_4088_18
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(16873..17844)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000375ECB5
hypothetical protein; K07027 Tax=CG_CP01_01
hypothetical protein
bjp_ig2599_scaffold_4088_19
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17869..19638)
DNA (1770bp) protein (590aa)
ATP-binding protein, putative id=3194844 bin=GWB1_CP_36_13 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ATPase involved in DNA repair {ECO:0000313|EMBL:AKB64916.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarc
ATP-binding protein, putative
bjp_ig2599_scaffold_4088_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19628..19873)
DNA (246bp) protein (82aa)
id=3194847 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Uncharacterized protein {ECO:0000313|EMBL:KER54348.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
bjp_ig2599_scaffold_4088_21
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19875..20798)
DNA (924bp) protein (308aa)
Uncharacterized protein id=3194848 bin=GWB1_CP_36_13 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB64915.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ma
hypothetical protein
bjp_ig2599_scaffold_4088_22
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(20795..22036)
DNA (1242bp) protein (414aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=CG_CP01_01
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QR97_ACEAZ
bjp_ig2599_scaffold_4088_23
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(22106..23149)
DNA (1044bp) protein (348aa)
id=4113429 Tax=CG_CP01_01
id=4113429 bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
bjp_ig2599_scaffold_4088_24
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23426..25243
DNA (1818bp) protein (606aa)
Precorrin-3B C17-methyltransferase id=2850920 bin=GWC2_Syntrophobacterales_56_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
precorrin-3B C17-methyltransferase Tax=RBG_16_Deltaproteobacteria_58_17_curated
precorrin-3B C17-methyltransferase
bjp_ig2599_scaffold_4088_25
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

25379..27646
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IJ82_9PLAN
hypothetical protein Tax=CG_CP01_01
hypothetical protein
Displaying 29 items

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