ggKbase home page

bjp_ig3402_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 606 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_4_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1317..2912)
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000362C098
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
phytoene dehydrogenase
bjp_ig3402_scaffold_4_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2969..4861)
DNA (1893bp) protein (631aa)
feoB; ferrous iron transport protein B; K04759 ferrous iron transport protein B id=12496875 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
feoB; ferrous iron transport protein B; K04759 ferrous iron transport protein B Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
feoB; ferrous iron transport protein B rbh
bjp_ig3402_scaffold_4_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4858..5118)
DNA (261bp) protein (87aa)
FeoA family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSJ5_VARPS
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:ACS18093.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (stra
bjp_ig3402_scaffold_4_4
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5341..6030
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003775E6C
TonB family protein; K03832 periplasmic protein TonB Tax=GWA2_Rhodocyclales_65_20_curated
hypothetical protein
bjp_ig3402_scaffold_4_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6034..6789
DNA (756bp) protein (252aa)
flagellar motor protein MotA n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B6807E rbh
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
biopolymer transporter ExbB
bjp_ig3402_scaffold_4_6
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6798..7217
DNA (420bp) protein (140aa)
biopolymer transporter ExbD n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031445FF
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=GWA2_Gallionellales_60_18_curated
biopolymer transporter ExbD
bjp_ig3402_scaffold_4_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7334..9559
DNA (2226bp) protein (742aa)
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI00023765F1
putative TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
TonB-dependent siderophore receptor
bjp_ig3402_scaffold_4_8
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9571..10725
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KDF5_THASP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACR02121.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
bjp_ig3402_scaffold_4_9
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10755..11771
DNA (1017bp) protein (339aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H69_DECAR
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
extracellular solute-binding protein
bjp_ig3402_scaffold_4_10
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11875..12906)
DNA (1032bp) protein (344aa)
Extra-cytoplasmic solute receptor n=2 Tax=Burkholderiaceae RepID=R7XCM7_9RALS
MFS transporter {ECO:0000313|EMBL:EYS85412.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
h16_A2779; extra-cytoplasmic solute receptor
bjp_ig3402_scaffold_4_11
unknown

Not on your lists

comp(13220..13396)
DNA (177bp) protein (59aa)

This feature has no annotations

bjp_ig3402_scaffold_4_12
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13505..14584)
DNA (1080bp) protein (360aa)
futA; Fe3+ ABC transporter periplasmic protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
ABC-type Fe3+ transport system, periplasmic component id=1698859 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
futA; ABC-type Fe3+ transport system, periplasmic component
bjp_ig3402_scaffold_4_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14820..15794
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363CD4B rbh
patatin; K07001 NTE family protein Tax=GWE1_Thiobacillus_62_9_curated
patatin
bjp_ig3402_scaffold_4_14
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15756..16400)
DNA (645bp) protein (215aa)
NLP/P60 protein n=1 Tax=Thauera sp. 63 RepID=N6Y8Z7_9RHOO
NLP/P60 protein {ECO:0000313|EMBL:ENO78882.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
NLP/P60
bjp_ig3402_scaffold_4_15
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16457..17968
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036FA8C8
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:BAP87586.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
bjp_ig3402_scaffold_4_16
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17928..19820
DNA (1893bp) protein (631aa)
prpE; acetyl-CoA synthetase (EC:6.2.1.17)
Acetyl-CoA synthetase {ECO:0000313|EMBL:AHB74394.1}; EC=6.2.1.17 {ECO:0000313|EMBL:AHB74394.1};; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
Acetyl-CoA synthetase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UAP0_9BURK rbh
bjp_ig3402_scaffold_4_17
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19956..20723
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035EAF45
transmembrane protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
transmembrane protein
bjp_ig3402_scaffold_4_18
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20781..21188
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J364_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ESJ22446.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HP
Hypothetical protein GlcG in glycolate utilization operon
bjp_ig3402_scaffold_4_19
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21209..22069)
DNA (861bp) protein (287aa)
2-polyprenylphenol hydroxylase-like oxidoreductase n=1 Tax=Beggiatoa alba B18LD RepID=I3CK77_9GAMM rbh
2-polyprenylphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EIJ44020.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" sourc
asrB_[H]; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase
bjp_ig3402_scaffold_4_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22056..23174)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QAH4_9ZZZZ rbh
(NiFe) hydrogenase subunit beta Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
bjp_ig3402_scaffold_4_21
unknown

Not on your lists

comp(23171..23626)
DNA (456bp) protein (152aa)

This feature has no annotations

bjp_ig3402_scaffold_4_22
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23623..24933)
DNA (1311bp) protein (437aa)
Nickel-dependent hydrogenase large subunit n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU97_9GAMM rbh
nickel-dependent hydrogenase large subunit
Nickel-dependent hydrogenase large subunit {ECO:0000313|EMBL:AEM47949.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacil
bjp_ig3402_scaffold_4_23
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24926..25723)
DNA (798bp) protein (266aa)
Hydrogenase/sulfur reductase, delta subunit n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DZK9_THIND
vhuG_[H]; hydrogenase/sulfur reductase, delta subunit
Tax=BJP_IG2102_Gammaproteobacteria_62_140
bjp_ig3402_scaffold_4_24
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25918..27225)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000364B5D0
transporter
Candidate transporter {ECO:0000313|EMBL:AEG92673.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinens
bjp_ig3402_scaffold_4_25
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27339..27806
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDD8_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:CBA31163.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter
lrp; leucine-responsive regulatory protein
bjp_ig3402_scaffold_4_26
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27822..28496)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SF51_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDP89125.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK
hypothetical protein
bjp_ig3402_scaffold_4_27
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28707..29999
DNA (1293bp) protein (431aa)
rocD; ornithine aminotransferase (EC:2.6.1.13)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=414684 species="Bacteria; Prot
Acetylornithine aminotransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRA7_RHOCS rbh
bjp_ig3402_scaffold_4_28
unknown

Not on your lists

30253..30996
DNA (744bp) protein (248aa)

This feature has no annotations

bjp_ig3402_scaffold_4_29
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31039..31845)
DNA (807bp) protein (269aa)
Enoyl-CoA hydratase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46Y68_CUPPJ rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJC21491.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
bjp_ig3402_scaffold_4_30
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31894..33549)
DNA (1656bp) protein (552aa)
AMP-dependent synthetase and ligase n=1 Tax=Burkholderia sp. RPE64 RepID=R4WRJ4_9BURK rbh
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:BAN27194.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
Displaying items 1-30 of 606 in total

View Taxonomy