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bjp_ig3402_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 632 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_18_1
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

2..1273
DNA (1272bp) protein (424aa)
fumarate reductase (EC:1.3.99.1)
Fumarate reductase flavoprotein subunit n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A8L1_9PROT rbh
Fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:CDA45219.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
bjp_ig3402_scaffold_18_2
Sutterella sp. CAG:521, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1290..2144
DNA (855bp) protein (285aa)
frdB; fumarate reductase (EC:1.3.99.1)
Fumarate reductase iron-sulfur subunit n=1 Tax=Sutterella sp. CAG:521 RepID=R7KV04_9BURK
Fumarate reductase iron-sulfur subunit {ECO:0000313|EMBL:CDE78762.1}; TaxID=1262977 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental sa
bjp_ig3402_scaffold_18_3
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2197..3699
DNA (1503bp) protein (501aa)
ABC transporter permease n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R4N2_RALPI rbh
2-oxoglutarate/malate translocator {ECO:0000313|EMBL:ETY75915.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
ABC transporter permease
bjp_ig3402_scaffold_18_4
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3833..5362
DNA (1530bp) protein (510aa)
fumarate hydratase n=1 Tax=Dyella japonica RepID=UPI0002E8E6E5
fumarate hydratase
Fumarate hydratase {ECO:0000313|EMBL:AIF47105.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
bjp_ig3402_scaffold_18_5
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5506..6162)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F2C31
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
bjp_ig3402_scaffold_18_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6323..6877
DNA (555bp) protein (185aa)
Protoporphyrinogen oxidase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LYN6_9EURY
Protoporphyrinogen oxidase {ECO:0000313|EMBL:EMA38293.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
flavodoxin
bjp_ig3402_scaffold_18_7
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6957..7958)
DNA (1002bp) protein (334aa)
Acetyl esterase (Deacetylase) n=1 Tax=Rheinheimera sp. A13L RepID=F7NWW6_9GAMM rbh
Acetyl esterase (Deacetylase) {ECO:0000313|EMBL:EGM77585.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp.
bjp_ig3402_scaffold_18_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8524..9795)
DNA (1272bp) protein (424aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031F914E
integral membrane sensor signal transduction histidine kinase
bjp_ig3402_scaffold_18_9
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9828..10520)
DNA (693bp) protein (231aa)
XRE family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC4873
XRE family transcriptional regulator {ECO:0000313|EMBL:EYR66480.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysob
winged helix family two component transcriptional regulator
bjp_ig3402_scaffold_18_10
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11052..11315
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2KA85_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGO34526.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
hypothetical protein
bjp_ig3402_scaffold_18_11
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11450..12079)
DNA (630bp) protein (210aa)
methyltransferase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00028A0476 rbh
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAN49597.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas re
bjp_ig3402_scaffold_18_12
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12192..13889)
DNA (1698bp) protein (566aa)
FAD dependent oxidoreductase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7F3_LEPCP rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACB36101.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC
bjp_ig3402_scaffold_18_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14036..15370
DNA (1335bp) protein (445aa)
frhB; coenzyme F420 hydrogenase (EC:1.12.98.1); K00441 coenzyme F420 hydrogenase beta subunit [EC:1.12.98.1] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219X9_RHOPB rbh
coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
bjp_ig3402_scaffold_18_14

Not on your lists

15594..16292
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QDD0_9ZZZZ
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBI05206.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
bjp_ig3402_scaffold_18_15
unknown

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16335..16523
DNA (189bp) protein (63aa)

This feature has no annotations

bjp_ig3402_scaffold_18_16
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16631..17605)
DNA (975bp) protein (325aa)
Transposase IS4 family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YGG3_9BURK
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADX55458.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderi
bjp_ig3402_scaffold_18_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17881..18276
DNA (396bp) protein (132aa)
GNAT family acetyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A00D2
Acetyltransferase {ECO:0000313|EMBL:EJZ59903.1}; TaxID=743713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens
GCN5-like N-acetyltransferase
bjp_ig3402_scaffold_18_18
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18439..18831
DNA (393bp) protein (131aa)
Glutathione-dependent formaldehyde-activating GFA n=2 Tax=Ochrobactrum intermedium RepID=C4WIP9_9RHIZ
Glutathione-dependent formaldehyde-activating protein {ECO:0000313|EMBL:ELT46996.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" so
glutathione-dependent formaldehyde-activating protein
bjp_ig3402_scaffold_18_19
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19102..19893
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWL2_LEPCP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB35013.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodni
bjp_ig3402_scaffold_18_20
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19981..21168
DNA (1188bp) protein (396aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EHP42995.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EHP42995.1};; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderi
3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase (EC:2.3.1.16 2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S390_9BURK rbh
bjp_ig3402_scaffold_18_21
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21305..21922
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00035FC4DE
hemolysin III family channel protein; K11068 hemolysin III Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
channel , hemolysin III family protein
bjp_ig3402_scaffold_18_22
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21897..22550)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QY01_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW92952.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
bjp_ig3402_scaffold_18_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22638..24338)
DNA (1701bp) protein (567aa)
AMP-dependent synthetase and ligase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLQ8_RUBGI rbh
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:BAL93945.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (st
bjp_ig3402_scaffold_18_24
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24549..25061)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00037F5003
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB34381.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 5116
bjp_ig3402_scaffold_18_25
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25251..25709)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJS1_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70629.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacter
hypothetical protein
bjp_ig3402_scaffold_18_26
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25903..26148
DNA (246bp) protein (82aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
bjp_ig3402_scaffold_18_27
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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26274..26606
DNA (333bp) protein (111aa)
Ribosomal subunit interface protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C5B2_NITHN
sigma 54 modulation protein/ribosomal protein S30EA Tax=RBG_16_Betaproteobacteria_66_20_curated
putative sigma 54 modulation protein/ribosomal protein S30EA
bjp_ig3402_scaffold_18_28
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26645..27823)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000381326A rbh
Membrane protein {ECO:0000313|EMBL:EYR68253.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;
benzoate transporter
bjp_ig3402_scaffold_18_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27870..28277)
DNA (408bp) protein (136aa)
Class I peptide chain release factor n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IN8_DECAR
class I peptide chain release factor; K15034 ribosome-associated protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
class I peptide chain release factor
bjp_ig3402_scaffold_18_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28322..29026)
DNA (705bp) protein (235aa)
hypothetical protein id=5082496 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying items 1-30 of 632 in total

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