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bjp_ig3402_scaffold_163

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_163_1
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1270
DNA (1269bp) protein (423aa)
BNR repeat domain protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NSQ5_9DELT
BNR repeat domain protein {ECO:0000313|EMBL:KFE62156.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hy
RCC1 repeat-containing protein
bjp_ig3402_scaffold_163_2
unknown

Not on your lists

1290..3032
DNA (1743bp) protein (581aa)

This feature has no annotations

bjp_ig3402_scaffold_163_3
Idiomarina sp. A28L, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3252..3860)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Idiomarina sp. A28L RepID=F7RXW4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN75480.1}; Flags: Precursor;; TaxID=1036674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="I
bjp_ig3402_scaffold_163_4
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3863..4084)
DNA (222bp) protein (74aa)
Putative transcriptional regulator n=1 Tax=Rheinheimera sp. A13L RepID=F7NR78_9GAMM
Putative transcriptional regulator {ECO:0000313|EMBL:EGM79673.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera
XRE family transcriptional regulator
bjp_ig3402_scaffold_163_5
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4193..5845
DNA (1653bp) protein (551aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S274_9RALS
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EPY00042.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ra
methylmalonate-semialdehyde dehydrogenase
bjp_ig3402_scaffold_163_6
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5982..6647)
DNA (666bp) protein (222aa)
Glutathione S-transferase domain protein n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AFC6_PSEF1 rbh
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain protein {ECO:0000313|EMBL:AEF21387.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
bjp_ig3402_scaffold_163_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6857..7951
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQB0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10528.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
cyclase/dehydrase
bjp_ig3402_scaffold_163_8
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8216..9454)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036AEA95 rbh
hypothetical protein Tax=RBG_16_Betaproteobacteria_56_24_curated
hypothetical protein
bjp_ig3402_scaffold_163_9
unknown

Not on your lists

9641..9739
DNA (99bp) protein (33aa)

This feature has no annotations

bjp_ig3402_scaffold_163_10
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9824..10687)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SU0_RHOFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD71163.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
bjp_ig3402_scaffold_163_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10816..12681)
DNA (1866bp) protein (622aa)
Diguanylate cyclase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXH8_RUBGI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:BAL97715.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245
bjp_ig3402_scaffold_163_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12963..14522
DNA (1560bp) protein (520aa)
Chemotaxis sensory transducer n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIF6_THIDA rbh
chemotaxis sensory transducer
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig3402_scaffold_163_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14565..16454)
DNA (1890bp) protein (630aa)
PAS:GGDEF protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKZ8_9BURK rbh
PAS:GGDEF protein {ECO:0000313|EMBL:EGJ09016.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35
diguanylate cyclase rbh
bjp_ig3402_scaffold_163_14
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16773..17972
DNA (1200bp) protein (400aa)
glycosyl hydrolase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037EFB71 rbh
glycosyl hydrolase, BNR repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
glycosyl hydrolase, BNR repeat-containing protein
bjp_ig3402_scaffold_163_15
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17989..18246
DNA (258bp) protein (86aa)
chemotaxis protein CheV n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037AE102
sulfur transfer protein ThiS Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
sulfur transfer protein ThiS
bjp_ig3402_scaffold_163_16
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18487..18921
DNA (435bp) protein (145aa)
PhnB protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SFG7_9DELT
Dehydrogenase {ECO:0000313|EMBL:KJK11359.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
YCII-related domain protein
bjp_ig3402_scaffold_163_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18931..19419
DNA (489bp) protein (163aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C092_DELAS
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KEH10064.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
bjp_ig3402_scaffold_163_18
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19446..19865
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030617C5
3-demethylubiquinone-9,3-methyltransferase
3-demethylubiquinone-9,3-methyltransferase {ECO:0000313|EMBL:BAL25595.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcu
bjp_ig3402_scaffold_163_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19862..20371
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0UDQ8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE54282.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.
hypothetical protein
bjp_ig3402_scaffold_163_20
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20368..20724
DNA (357bp) protein (119aa)
DGPF domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XE87_9BURK
DGPF domain protein {ECO:0000313|EMBL:EFF74860.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudi
DGPF domain-containing protein 1
bjp_ig3402_scaffold_163_21

Not on your lists

20712..22028
DNA (1317bp) protein (439aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKH1_SORC5 rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AIA12642.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ECF subfamily RNA polymerase sigma factor
bjp_ig3402_scaffold_163_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

22052..22438
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027E5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82868.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
bjp_ig3402_scaffold_163_23
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22492..23922)
DNA (1431bp) protein (477aa)
Outer membrane efflux protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7P0Y2_CHRVO rbh
Outer membrane protein OprM {ECO:0000313|EMBL:EXI75604.1}; Flags: Precursor;; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accum
oprM; outer membrane efflux protein
bjp_ig3402_scaffold_163_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23919..27125)
DNA (3207bp) protein (1069aa)
Hydrophobe/amphiphile efflux-1 family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GMZ5_9BURK rbh
hydrophobe/amphiphile efflux-1 family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hydrophobe/amphiphile efflux-1 family protein
bjp_ig3402_scaffold_163_25
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27311..28675)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003776503 rbh
Efflux pump periplasmic linker BepD {ECO:0000313|EMBL:KFB75783.1}; Flags: Precursor;; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidat
AcrA/E family efflux transporter MFP subunit
bjp_ig3402_scaffold_163_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28978..29733
DNA (756bp) protein (252aa)
Transcriptional regulator, TetR family id=1357145 bin=GWE1_T_denit_62_9 species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor Tax=GWE1_Thiobacillus_62_9_curated
transcriptional regulator, TetR family
bjp_ig3402_scaffold_163_27
unknown

Not on your lists

comp(29884..30132)
DNA (249bp) protein (83aa)

This feature has no annotations

bjp_ig3402_scaffold_163_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30293..31219
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZC41_9GAMM
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
LysR family transcriptional regulator
bjp_ig3402_scaffold_163_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31353..34697
DNA (3345bp) protein (1115aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Caldimonas manganoxidans RepID=UPI000380BCEB rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig3402_scaffold_163_30
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34782..36275
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000378DDE3 rbh
GTPase subunit of restriction endonuclease
GTPase subunit of restriction endonuclease, putative {ECO:0000313|EMBL:ABZ84574.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="
Displaying items 1-30 of 71 in total

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