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Ig5770_scaffold_395

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_395_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1..303)
DNA (303bp) protein (101aa)
Cation diffusion facilitator family transporter n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWR3_TEPAE
cation diffusion facilitator family transporter
Tax=CG_Omnitr_03
Ig5770_scaffold_395_2
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

comp(359..2566)
DNA (2208bp) protein (736aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000366DE44
protein-export membrane protein SecD rbh
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Ig5770_scaffold_395_3
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(2570..2899)
DNA (330bp) protein (110aa)
Preprotein translocase, YajC subunit n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y8E4_TREAZ
preprotein translocase subunit YajC
Tax=RBG_13_OP3X_46_9_curated
Ig5770_scaffold_395_4
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(2884..3996)
DNA (1113bp) protein (371aa)
Queuine tRNA-ribosyltransferase id=3681853 bin=GWF2_OP3_43_52 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
queuine tRNA-ribosyltransferase
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Ig5770_scaffold_395_5
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3999..5027)
DNA (1029bp) protein (343aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPR9_9CLOT
Ig5770_scaffold_395_6
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

comp(5124..6344)
DNA (1221bp) protein (407aa)
SpoIID/LytB domain id=4188365 bin=GWF2_OP3_38_59 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
SpoIID/LytB domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
Ig5770_scaffold_395_7
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6708..7262)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J538_DESRM
hypothetical protein
Diacylglucosamine hydrolase like protein {ECO:0000313|EMBL:GAE87048.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
Ig5770_scaffold_395_8
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

comp(7326..8363)
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB id=2651447 bin=GWC2_OP3_44_8 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Holliday junction DNA helicase RuvB
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Ig5770_scaffold_395_9
unknown

Not on your lists

comp(8406..8915)
DNA (510bp) protein (170aa)
fimbrial protein pilA n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628B7A
Ig5770_scaffold_395_10
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(8878..9507)
DNA (630bp) protein (210aa)
Holliday junction ATP-dependent DNA helicase RuvA id=4113636 bin=GWF2_OP3_43_52 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DNA recombination protein RuvA
Tax=RBG_13_WOR_2_41_10_curated
Ig5770_scaffold_395_11
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

comp(9646..10128)
DNA (483bp) protein (161aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00036E9414
Tax=CG_Omnitr_04
Ig5770_scaffold_395_12
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(10200..10946)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein NITGR_520016 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YZ20_9BACT rbh
hypothetical protein
Tax=RBG_13_OP3X_46_9_curated
Ig5770_scaffold_395_13
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11006..13129)
DNA (2124bp) protein (708aa)
Translation elongation factor G n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GI56_9FIRM
Translation elongation factor G {ECO:0000313|EMBL:EEG76904.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
fusA; Elongation factor G
Ig5770_scaffold_395_14
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(13329..14471)
DNA (1143bp) protein (381aa)
hypothetical protein id=24428086 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein rbh
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Ig5770_scaffold_395_15
CG_Omnitr_07, Omnitrophica, Bacteria

Not on your lists

comp(14619..14936)
DNA (318bp) protein (106aa)
id=3461704 bin=GWF2_OP3_38_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=CG_Omnitr_07
Ig5770_scaffold_395_16
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(15505..16665)
DNA (1161bp) protein (387aa)
IMP dehydrogenase family protein id=4556757 bin=GWA2_OP3_53_43 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
guaB; IMP dehydrogenase/GMP reductase rbh
Tax=CG_Omnitr_03
Ig5770_scaffold_395_17
CG_Omnitr_07, Omnitrophica, Bacteria

Not on your lists

comp(16708..18051)
DNA (1344bp) protein (448aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3J2_GEOUR
TPR repeat-containing protein
Tax=CG_Omnitr_07
Ig5770_scaffold_395_18
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(18057..19691)
DNA (1635bp) protein (545aa)
60 kDa chaperonin id=4237259 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Ig5770_scaffold_395_19
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19774..20064)
DNA (291bp) protein (97aa)
10 kDa chaperonin id=2242159 bin=GWB2_CP_45_9 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
molecular chaperone GroES
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Ig5770_scaffold_395_20
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

comp(20403..21167)
DNA (765bp) protein (255aa)
CoaX: type III pantothenate kinase id=4387038 bin=GWA2_OP3_53_43 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
transcriptional activator, Baf family
Tax=RBG_13_WOR-2_44_8b_curated
Ig5770_scaffold_395_21
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(21244..22203)
DNA (960bp) protein (320aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin-(Acetyl-CoA carboxylase) ligase id=4404637 bin=GWF2_OP3_38_59 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Ig5770_scaffold_395_22
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(22160..24160)
DNA (2001bp) protein (667aa)
UvrABC system protein B id=4237058 bin=GWF2_OP3_43_52 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
excinuclease ABC subunit B
Tax=CG_Omnitr_03
Ig5770_scaffold_395_23
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(24339..25274)
DNA (936bp) protein (312aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVP3_9BACT
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:BAL59672.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
Ig5770_scaffold_395_24
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists


comp(25271..28039)
DNA (2769bp) protein (923aa)
Valine--tRNA ligase id=4237054 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
valyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Ig5770_scaffold_395_25
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(28125..29081)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00038045F0
DNA methylase N-4/N-6 domain-containing protein
Tax=CG_OP9-01
Ig5770_scaffold_395_26

Not on your lists

comp(29078..29428)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PEJ4_9FLAO
Marine sediment metagenome DNA, contig: S03H2_L01220 {ECO:0000313|EMBL:GAH46549.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Ig5770_scaffold_395_27
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

comp(29716..31275)
DNA (1560bp) protein (520aa)
2-isopropylmalate synthase/homocitrate synthase family protein id=1944555 bin=GWB2_CP_45_9 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
alpha-isopropylmalate/homocitrate synthase family transferase
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
Ig5770_scaffold_395_28
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(31386..32630)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000367074D
aspartate kinase
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Ig5770_scaffold_395_29
GWA2_OP3X_41_15_curated, OP3X, Bacteria

Not on your lists

comp(32685..33893)
DNA (1209bp) protein (403aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=4945815 bin=GWC2_OP3_44_8 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
homoserine kinase
Tax=GWA2_OP3X_41_15_curated
Ig5770_scaffold_395_30
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(33890..34969)
DNA (1080bp) protein (360aa)
thrC2; threonine synthase (EC:4.2.3.1)
Threonine synthase id=4236900 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RBG_13_WOR_2_41_10_curated
Displaying items 1-30 of 34 in total

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