ggKbase home page

Ig5772_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 270 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5772_scaffold_84_1
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35..400)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AEM4_GEOSK
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:BAO89140.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
Ig5772_scaffold_84_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

640..921
DNA (282bp) protein (94aa)
Competence protein ComEA id=1343840 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
competence protein ComEA
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1051..1827
DNA (777bp) protein (259aa)
zinc/iron permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000363172F rbh
ZIP Zinc transporter rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_84_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1759..1980)
DNA (222bp) protein (74aa)
Uncharacterized protein id=1343842 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2006..3337
DNA (1332bp) protein (444aa)
Ribosomal protein S12 methylthiotransferase RimO id=1343843 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_6
unknown

Not on your lists

3520..3879
DNA (360bp) protein (120aa)

This feature has no annotations

Ig5772_scaffold_84_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3838..4836)
DNA (999bp) protein (333aa)
hypothetical protein id=12494321 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4938..6182
DNA (1245bp) protein (415aa)
cell division protein FtsX n=1 Tax=Thiobacillus denitrificans RepID=UPI000381F2A7 rbh
LolC/E family lipoprotein releasing system, transmembrane protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6175..6879
DNA (705bp) protein (235aa)
ABC transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000374397D rbh
lipoprotein releasing system, ATP-binding protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_84_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6892..9237
DNA (2346bp) protein (782aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=12495426 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
DNA internalization-related competence protein ComEC/Rec2 rbh
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AAZ97712.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_84_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9230..11371
DNA (2142bp) protein (714aa)
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5) rbh
GTP pyrophosphokinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E3965 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig5772_scaffold_84_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11358..12419)
DNA (1062bp) protein (354aa)
tRNA 2-selenouridine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA849 rbh
tRNA 2-selenouridine synthase rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_13
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12447..13487
DNA (1041bp) protein (347aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] id=12498564 bin=THIO_MID species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
selenide, water dikinase rbh
Ig5772_scaffold_84_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13489..13662)
DNA (174bp) protein (58aa)
hypothetical protein id=12495423 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig5772_scaffold_84_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13795..14244)
DNA (450bp) protein (150aa)
SsrA-binding protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=SSRP_THIDA
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_84_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14295..14729
DNA (435bp) protein (145aa)
Putative uncharacterized protein id=1320290 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_84_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14726..15064
DNA (339bp) protein (113aa)
RnfH n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D819A
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15079..15564)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036AB38D
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig5772_scaffold_84_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15557..15913)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C77F7
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16134..17594
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase id=1320293 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17681..19243
DNA (1563bp) protein (521aa)
guaA; GMP synthase (EC:6.3.5.2) rbh
GMP synthase [glutamine-hydrolyzing] id=1320295 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19251..20495
DNA (1245bp) protein (415aa)
Putative transmembrane protein id=1320296 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
transmembrane protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20479..22110
DNA (1632bp) protein (544aa)
Putative FAD-dependent dehydrogenase id=1320297 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
FAD-dependent dehydrogenase rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22184..22948)
DNA (765bp) protein (255aa)
Predicted transmembrane transcriptional regulator (Anti-sigma factor) id=1320298 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
transmembrane transcriptional regulator (anti-sigma factor) rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22945..23442)
DNA (498bp) protein (166aa)
Sigma-24 (FecI) id=1320299 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sigma-24 (FecI)
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23443..23820)
DNA (378bp) protein (126aa)
Probable transmembrane protein id=1320300 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24031..24369
DNA (339bp) protein (113aa)
Arsenical resistance operon repressor id=1320301 bin=GWE1_T_denit_62_9 species=Collimonas fungivorans genus=Collimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
arsR; arsenical resistance operon repressor
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24366..24791
DNA (426bp) protein (142aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=1320302 bin=GWE1_T_denit_62_9 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Glyoxalase/bleomycin resistance protein/dioxygenase
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_84_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24822..25238
DNA (417bp) protein (139aa)
protein tyrosine phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003619D35
protein tyrosine phosphatase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig5772_scaffold_84_30
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25241..26320
DNA (1080bp) protein (360aa)
ACR3 family arsenite transporter; K03325 arsenite transporter, ACR3 family id=12498602 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ACR3 family arsenite transporter
Tax=CG_Hydro_01
Displaying items 1-30 of 270 in total

View Taxonomy