ggKbase home page

Montesol18_S2p5_coassembly_scaffold_1068490

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18_S2p5_coassembly_scaffold_1068490_1
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..98
-----------------
DNA (96bp)
protein (32aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Bacillus subtilis subsp. subtilis str. RO-NN-1 RepID=G4P3A5_BACIU
Contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20259.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
Montesol18_S2p5_coassembly_scaffold_1068490_2
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(95..916)
-----------------
DNA (822bp)
protein (274aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JVM1_9BACT
Montesol18_S2p5_coassembly_scaffold_1068490_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(988..1497)
-----------------
DNA (510bp)
protein (170aa)
pyrR; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase/pyrimidine operon attenuation protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQY9_9BACT
Phosphoribosyltransferase {ECO:0000313|EMBL:KIF34843.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Montesol18_S2p5_coassembly_scaffold_1068490_4
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1494..1961)
-----------------
DNA (468bp)
protein (156aa)
Transcriptional regulator, AsnC family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JUP3_9BACT
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ELR71264.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
transcriptional regulator
Montesol18_S2p5_coassembly_scaffold_1068490_5
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1965..3242)
-----------------
DNA (1278bp)
protein (426aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JZQ8_9BACT
Montesol18_S2p5_coassembly_scaffold_1068490_6
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3286..3462)
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein id=2677945 bin=GWF1_Flavobacteria_32_7 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Tax=GWF1_Flavobacteria_32_7_curated
Montesol18_S2p5_coassembly_scaffold_1068490_7
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3642..4748)
-----------------
DNA (1107bp)
protein (369aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JUK6_9BACT
carbamoyl-phosphate synthase small subunit
Montesol18_S2p5_coassembly_scaffold_1068490_8
unknown

Not on your lists

4816..5121
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

Montesol18_S2p5_coassembly_scaffold_1068490_9
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(5193..5702)
-----------------
DNA (510bp)
protein (170aa)
50S ribosomal protein L17 n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2M9_OWEHD
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
50S ribosomal protein L17
Montesol18_S2p5_coassembly_scaffold_1068490_10
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5702..6691)
-----------------
DNA (990bp)
protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JYG2_9BACT
Montesol18_S2p5_coassembly_scaffold_1068490_11
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(6718..7266)
-----------------
DNA (549bp)
protein (183aa)
30S ribosomal protein S4 n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWV9_9BACT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
rpsD; 30S ribosomal protein S4
Montesol18_S2p5_coassembly_scaffold_1068490_12
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(7342..7749)
-----------------
DNA (408bp)
protein (136aa)
30S ribosomal protein S11 n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JZQ6_9BACT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
30S ribosomal protein S11p
Montesol18_S2p5_coassembly_scaffold_1068490_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(7848..8228)
-----------------
DNA (381bp)
protein (127aa)
30S ribosomal protein S13 n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N5W6_9BACT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
30S ribosomal protein S13
Montesol18_S2p5_coassembly_scaffold_1068490_14
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(8652..9446)
-----------------
DNA (795bp)
protein (265aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Methionine aminopeptidase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWV3_9BACT
methionine aminopeptidase
Montesol18_S2p5_coassembly_scaffold_1068490_15
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(9453..9638)
-----------------
DNA (186bp)
protein (62aa)
Protein translocase subunit SecY n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JZQ4_9BACT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
preprotein translocase subunit SecY
Displaying 15 items

View Taxonomy