ggKbase home page

Montesol18-Sp2_coassembly_scaffold_614918

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_614918_1
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3..599)
DNA (597bp) protein (199aa)
type 11 methyltransferase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B60B20
type 11 methyltransferase
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
Montesol18-Sp2_coassembly_scaffold_614918_2
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(777..2099)
DNA (1323bp) protein (441aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase id=4710252 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_16_RIF03_38_10_curated
Montesol18-Sp2_coassembly_scaffold_614918_3
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(2113..2832)
DNA (720bp) protein (240aa)
NAD-dependent epimerase/dehydratase id=4039739 bin=GWF2_OP3_43_52 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
NAD-dependent epimerase/dehydratase
Tax=GWF2_WOR_2_43_52_curated
Montesol18-Sp2_coassembly_scaffold_614918_4
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(2882..3133)
DNA (252bp) protein (84aa)
NAD-dependent epimerase/dehydratase id=3220978 bin=GWC2_OP3_44_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
NAD-dependent epimerase/dehydratase
Tax=GWF2_WOR_2_43_52_curated
Montesol18-Sp2_coassembly_scaffold_614918_5
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3182..4123)
DNA (942bp) protein (314aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
GDP-L-fucose synthase n=1 Tax=planctomycete KSU-1 RepID=I3INU7_9PLAN
nucleoside-diphosphate-sugar epimerase
Montesol18-Sp2_coassembly_scaffold_614918_6
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4104..5132)
DNA (1029bp) protein (343aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000365A075
Tax=RBG_13_Deltaproteobacteria_58_19_curated
Montesol18-Sp2_coassembly_scaffold_614918_7
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(5186..6427)
DNA (1242bp) protein (414aa)
O-antigen polymerase id=4801478 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
O-antigen polymerase
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
Montesol18-Sp2_coassembly_scaffold_614918_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6745..8130)
DNA (1386bp) protein (462aa)
manB_pgm; bifunctional Phosphoglucomutase/Phosphomannomutase (EC:5.4.2.8 5.4.2.2)
Bifunctional Phosphoglucomutase/Phosphomannomutase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHE2_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_614918_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8173..9621)
DNA (1449bp) protein (483aa)
manC_pmi; bifunctional Mannose-1-phosphate guanylyltransferase/Mannose-6-phosphate isomerase (EC:2.7.7.22 5.3.1.8)
Bifunctional Mannose-1-phosphate guanylyltransferase/Mannose-6-phosphate isomerase id=3927297 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_614918_10
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

9774..10736
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037B0741
hypothetical protein
Tax=CG_Nitrosp_02
Montesol18-Sp2_coassembly_scaffold_614918_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10794..11618
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003AADF9E
Uncharacterized protein {ECO:0000313|EMBL:ETW96984.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Montesol18-Sp2_coassembly_scaffold_614918_12
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(11687..12319)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003738384
type 11 methyltransferase
Tax=RBG_13_Aminicenantes_63_10_curated
Montesol18-Sp2_coassembly_scaffold_614918_13
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(12333..13463)
DNA (1131bp) protein (377aa)
Glycosyl transferase group 1 id=3956940 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
Tax=GWA2_RIF03_38_11_curated
Montesol18-Sp2_coassembly_scaffold_614918_14
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13450..14190)
DNA (741bp) protein (247aa)
Polysaccharide deacetylase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EFV4_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCO07571.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
polysaccharide deacetylase
Montesol18-Sp2_coassembly_scaffold_614918_15
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(14187..15299)
DNA (1113bp) protein (371aa)
UDP-glucose:(Heptosyl)LPS alpha-1,3-glucosyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIV4_9BACT
UDP-glucose:(Heptosyl)LPS alpha-1,3-glucosyltransferase {ECO:0000313|EMBL:BAL56090.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
rfaG; ipopolysaccharide core biosynthesis protein RfaG
Montesol18-Sp2_coassembly_scaffold_614918_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15300..16151)
DNA (852bp) protein (284aa)
Methyltransferase, FkbM family protein id=2520382 bin=GWC2_Syntrophobacterales_56_13 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
methyltransferase FkbM family
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Montesol18-Sp2_coassembly_scaffold_614918_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16148..17293)
DNA (1146bp) protein (382aa)
Protein involved in cellulose biosynthesis (CelD) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0F001_9BACT
Protein involved in cellulose biosynthesis (CelD)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Montesol18-Sp2_coassembly_scaffold_614918_18
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17339..19153)
DNA (1815bp) protein (605aa)
Asparagine synthase {ECO:0000313|EMBL:KFE26960.1}; EC=6.3.5.4 {ECO:0000313|EMBL:KFE26960.1};; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
Asparagine synthetase n=1 Tax=Vibrio cholerae HE-16 RepID=K2XKH2_VIBCL
asparagine synthase
Montesol18-Sp2_coassembly_scaffold_614918_19
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(19166..20275)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00036F22C7
glycosyl transferase family protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
Montesol18-Sp2_coassembly_scaffold_614918_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(20335..21369)
DNA (1035bp) protein (345aa)
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] id=14627222 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
3-deoxy-D-manno-octulosonic-acid transferase
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Montesol18-Sp2_coassembly_scaffold_614918_21
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(21441..22481)
DNA (1041bp) protein (347aa)
Glycosyl transferase family 9 id=1251071 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
lipopolysaccharide heptosyltransferase II
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
Montesol18-Sp2_coassembly_scaffold_614918_22
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(22478..23239)
DNA (762bp) protein (254aa)
Glycosyl transferase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R6K5_OWEHD
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
Montesol18-Sp2_coassembly_scaffold_614918_23
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(23246..23788)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00036402C6
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
Montesol18-Sp2_coassembly_scaffold_614918_24
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23803..23970)
DNA (168bp) protein (56aa)
Putative uncharacterized protein id=2284568 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Deltaproteobacteria_42_11_curated
Montesol18-Sp2_coassembly_scaffold_614918_25
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(23985..24482)
DNA (498bp) protein (166aa)
Cytidyltransferase-related domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC4_CHLTF
cytidyltransferase-related domain-containing protein
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:AEP11344.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Montesol18-Sp2_coassembly_scaffold_614918_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24486..25493)
DNA (1008bp) protein (336aa)
PfkB domain-containing protein id=14627220 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
PfkB domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Montesol18-Sp2_coassembly_scaffold_614918_27
bacterium UASB270, Bacteria

Not on your lists

comp(25518..27038)
DNA (1521bp) protein (507aa)
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] id=14627219 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:GAK57505.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
histidinol-phosphate phosphatase family protein
Montesol18-Sp2_coassembly_scaffold_614918_28
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27035..29458)
DNA (2424bp) protein (808aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|SAAS:SAAS00093878};; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
tetraacyldisaccharide 4''''-kinase n=1 Tax=Selenomonas bovis RepID=UPI000365B7F7
Montesol18-Sp2_coassembly_scaffold_614918_29
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29601..30104)
DNA (504bp) protein (168aa)
protein of unknown function DUF374 n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2ABD8
hypothetical protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
Montesol18-Sp2_coassembly_scaffold_614918_30
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(30088..31830)
DNA (1743bp) protein (581aa)
msbA; lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHJ5_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Displaying items 1-30 of 54 in total

View Taxonomy