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Montesol18-Sp2_coassembly_scaffold_1014969

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_1014969_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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2..463
DNA (462bp) protein (154aa)
Phage integrase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA15_9BACT
int; phage integrase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_1014969_trna_1
unknown

Not on your lists

comp(473..544)
DNA (72bp)
transferRNA Met
Montesol18-Sp2_coassembly_scaffold_1014969_2
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1182..1559)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWU1_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE13822.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Montesol18-Sp2_coassembly_scaffold_1014969_3
unknown

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comp(1739..1927)
DNA (189bp) protein (63aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_1014969_4

Not on your lists

comp(1955..2668)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium HB1-20 RepID=Q99IZ3_9BACT
Marine sediment metagenome DNA, contig: S01H1_S40824 {ECO:0000313|EMBL:GAG47215.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_1014969_5
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

comp(3109..4056)
DNA (948bp) protein (316aa)
cld2; chlorite dismutase (EC:1.13.11.49)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00036EB5B2
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
Montesol18-Sp2_coassembly_scaffold_1014969_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4318..7221
DNA (2904bp) protein (968aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PC78_9BACT
Montesol18-Sp2_coassembly_scaffold_1014969_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7223..7744
DNA (522bp) protein (174aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Lipoprotein signal peptidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PC79_9BACT
Montesol18-Sp2_coassembly_scaffold_1014969_8
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

7866..8888
DNA (1023bp) protein (341aa)
rluD2; 23S rRNA pseudouridine synthase (EC:4.2.1.70 5.4.99.-)
Pseudouridine synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA98_9BACT
Tax=RBG_16_Nitrospirae_43_11_curated
Montesol18-Sp2_coassembly_scaffold_1014969_9
Leptospirillum sp. Group II 'C75', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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8981..9211
DNA (231bp) protein (77aa)
Putative transcriptional regulator, XRE family n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AQ34_9BACT
XRE family transcriptional regulator
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:EIJ76573.1}; TaxID=1159328 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II 'C75'.;"
Montesol18-Sp2_coassembly_scaffold_1014969_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(9269..10717)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ95_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43469.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Montesol18-Sp2_coassembly_scaffold_1014969_11
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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comp(10822..11451)
DNA (630bp) protein (210aa)
V-type ATP synthase subunit D id=4794213 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
V-type ATPase, D subunit
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
Montesol18-Sp2_coassembly_scaffold_1014969_12
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(11471..12850)
DNA (1380bp) protein (460aa)
V-type ATP synthase beta chain id=4794214 bin=GWA2_Elusimicrobia_66_18 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
archaeal/vacuolar-type H+-ATPase subunit B
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
Montesol18-Sp2_coassembly_scaffold_1014969_13
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

Not on your lists

comp(12847..14595)
DNA (1749bp) protein (583aa)
V-type ATP synthase alpha chain 2 id=4794215 bin=GWA2_Elusimicrobia_66_18 species=Methanospirillum hungatei genus=Methanospirillum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
archaeal/vacuolar-type H+-ATPase subunit A
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
Montesol18-Sp2_coassembly_scaffold_1014969_14
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(14646..14975)
DNA (330bp) protein (110aa)
V-type ATP synthase subunit F id=4794216 bin=GWA2_Elusimicrobia_66_18 species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
atpF-2; A-type ATP synthase subunit F
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
Montesol18-Sp2_coassembly_scaffold_1014969_15
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14975..16051)
DNA (1077bp) protein (359aa)
V-type ATP synthase subunit C id=4794242 bin=GWA2_Elusimicrobia_66_18 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
atpC-2; A-type ATP synthase subunit C
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
Montesol18-Sp2_coassembly_scaffold_1014969_16
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16062..16664)
DNA (603bp) protein (201aa)
atpE; V-type ATP synthase subunit E (EC:3.6.3.14)
V-type ATP synthase subunit E id=4794243 bin=GWA2_Elusimicrobia_66_18 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=GWC2_Deltaproteobacteria_42_11_curated
Montesol18-Sp2_coassembly_scaffold_1014969_17
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

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comp(16671..16889)
DNA (219bp) protein (73aa)
H+transporting two-sector ATPase C subunit id=4794244 bin=GWA2_Elusimicrobia_66_18 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ATP synthase subunit C
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
Montesol18-Sp2_coassembly_scaffold_1014969_18
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(16892..18808)
DNA (1917bp) protein (639aa)
V-type ATPase, 116 kDa subunit id=4794245 bin=GWA2_Elusimicrobia_66_18 species=Methanospirillum hungatei genus=Methanospirillum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
archaeal/vacuolar-type H+-ATPase subunit I
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_1014969_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18828..19160)
DNA (333bp) protein (111aa)
atpH; A-type ATP synthase subunit H (EC:3.6.3.14); K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] id=24645826 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ATP synthase archaeal, H subunit {ECO:0000313|EMBL:ERH10044.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ATP synthase B/B'' CF(0)
Montesol18-Sp2_coassembly_scaffold_1014969_20
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(19229..19636)
DNA (408bp) protein (136aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
Montesol18-Sp2_coassembly_scaffold_1014969_21
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(19712..20710)
DNA (999bp) protein (333aa)
molybdenum cofactor biosynthesis protein MoaA n=1 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=UPI0003804A5F
molybdenum cofactor biosynthesis protein A
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
Montesol18-Sp2_coassembly_scaffold_1014969_22
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(20707..20913)
DNA (207bp) protein (69aa)
Sec-independent protein translocase protein TatA n=2 Tax=Desulfovibrio RepID=D9YE45_9DELT
twin-arginine translocation protein, TatA/E family subunit
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_1014969_23
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20932..21408)
DNA (477bp) protein (159aa)
Putative transcriptional regulator, Crp/Fnr family id=4127991 bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative transcriptional regulator, Crp/Fnr family
Tax=CG_Delta_01
Montesol18-Sp2_coassembly_scaffold_1014969_24
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21731..22246)
DNA (516bp) protein (172aa)
hypothetical protein; K07491 putative transposase id=7200229 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
Montesol18-Sp2_coassembly_scaffold_1014969_25
unknown

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22619..22912
DNA (294bp) protein (98aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_1014969_26
unknown

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23187..23324
DNA (138bp) protein (46aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_1014969_27
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23562..24263)
DNA (702bp) protein (234aa)
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2)
GMP synthase-Glutamine amidotransferase domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWL3_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Montesol18-Sp2_coassembly_scaffold_1014969_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(24453..26543)
DNA (2091bp) protein (697aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003662036
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Nitrospirae_64_22_curated
Montesol18-Sp2_coassembly_scaffold_1014969_29
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26600..27283)
DNA (684bp) protein (228aa)
Response regulator n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VH7_CYTH3
uhpA; response regulator
Response regulator {ECO:0000313|EMBL:ABG58589.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
Displaying items 1-30 of 31 in total

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