ggKbase home page

Montesol18-Sp2_coassembly_scaffold_1249318

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_1249318_1
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1172)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B0DDC
nucleotide sugar aminotransferase
Nucleotide sugar aminotransferase {ECO:0000313|EMBL:AJP47787.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Montesol18-Sp2_coassembly_scaffold_1249318_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1176..1532)
DNA (357bp) protein (119aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXW9_9GAMM
transmembrane protein
Membrane protein {ECO:0000313|EMBL:EQM86222.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Montesol18-Sp2_coassembly_scaffold_1249318_3
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1529..2725)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000375D962
Uncharacterized protein {ECO:0000313|EMBL:ENA33444.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
ATP synthase subunit alpha
Montesol18-Sp2_coassembly_scaffold_1249318_4

Not on your lists

comp(2806..3057)
DNA (252bp) protein (84aa)
Acyl carrier protein n=1 Tax=uncultured bacterium RepID=K1ZN54_9BACT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acpP; acyl carrier protein
Montesol18-Sp2_coassembly_scaffold_1249318_5
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3088..4338)
DNA (1251bp) protein (417aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Thermincola potens (strain JR) RepID=D5X8P0_THEPJ
3-oxoacyl-(acyl-carrier-protein) synthase 2
Montesol18-Sp2_coassembly_scaffold_1249318_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(4342..5301)
DNA (960bp) protein (320aa)
Putative Alpha/beta hydrolase fold n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJV9_9BACT
alpha/beta hydrolase
Putative Alpha/beta hydrolase fold {ECO:0000313|EMBL:CBE67542.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Montesol18-Sp2_coassembly_scaffold_1249318_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(5298..6683)
DNA (1386bp) protein (462aa)
Aminotransferase class-III n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW0_9BACT
aminotransferase class-III
Aminotransferase class-III {ECO:0000313|EMBL:CBE67543.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Montesol18-Sp2_coassembly_scaffold_1249318_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(6680..7357)
DNA (678bp) protein (226aa)
2,3-diketo-5-methylthio-1-phosphopentane phosphatase (phosphoserine phosphatase) (serB) (EC:3.1.3.3)
Putative 2, 3-diketo-5-methylthio-1-phosphopentane phosphatase (Phosphoserine phosphatase) (SerB) {ECO:0000313|EMBL:CBE67544.1}; EC=3.1.3.3 {ECO:0000313|EMBL:CBE67544.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative 2, 3-diketo-5-methylthio-1-phosphopentane phosphatase (Phosphoserine phosphatase) (SerB) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW1_9BACT
Montesol18-Sp2_coassembly_scaffold_1249318_9
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7586..8953)
DNA (1368bp) protein (456aa)
Sigma-54 dependent DNA-binding response regulator id=4793947 bin=GWC2_Deltaproteobacteria_56_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
sigma-54 dependent DNA-binding response regulator
Tax=GWB2_Deltaproteobacteria_55_19_curated
Montesol18-Sp2_coassembly_scaffold_1249318_10
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8956..10578)
DNA (1623bp) protein (541aa)
Putative periplasmic sensor signal transduction histidine kinase id=2233791 bin=GWB2_Proteobacteria_55_19 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
periplasmic sensor signal transduction histidine kinase
Tax=GWB2_Deltaproteobacteria_55_19_curated
Montesol18-Sp2_coassembly_scaffold_1249318_11
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10791..11858
DNA (1068bp) protein (356aa)
RNA-3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase id=3375459 bin=GWC2_Deltaproteobacteria_42_51 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
Montesol18-Sp2_coassembly_scaffold_1249318_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(11876..12856)
DNA (981bp) protein (327aa)
hypothetical protein GobsU_12882 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4DDE id=5223865 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protein of unknown function DUF6 transmembrane
Tax=RBG_16_RIF_WS3X_71_46_curated
Montesol18-Sp2_coassembly_scaffold_1249318_13
unknown

Not on your lists

13142..13939
DNA (798bp) protein (266aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_1249318_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13953..14639
DNA (687bp) protein (229aa)
Outer membrane lipoprotein Slp n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AR44_PELPD
outer membrane lipoprotein Slp
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_1249318_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

14752..16293
DNA (1542bp) protein (514aa)
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] id=14625649 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Tax=CSP1_6_Rokubacteria
Montesol18-Sp2_coassembly_scaffold_1249318_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

16300..17313
DNA (1014bp) protein (338aa)
glk; glucokinase (Glucose kinase) (EC:2.7.1.2)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000345A134
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Montesol18-Sp2_coassembly_scaffold_1249318_17
unknown

Not on your lists

comp(17411..17941)
DNA (531bp) protein (177aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_1249318_18
unknown

Not on your lists

comp(18005..18241)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 18 items

View Taxonomy