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Montesol18-Sp2_coassembly_scaffold_175196

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_175196_1
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..99
-----------------
DNA (99bp)
protein (33aa)
Putative urea short-chain amide uptake protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I4Q1_AZOC5
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJV08322.1}; Flags: Fragment;; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
urea short-chain amide uptake protein
Montesol18-Sp2_coassembly_scaffold_175196_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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163..588
-----------------
DNA (426bp)
protein (142aa)
Periplasmic urea/short-chain amide-binding protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4W4_9PROT
Putative ABC transporter, urea, substrate-binding, UrtA
Putative ABC transporter, urea, substrate-binding, UrtA {ECO:0000313|EMBL:CDK99232.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Montesol18-Sp2_coassembly_scaffold_175196_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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736..2178
-----------------
DNA (1443bp)
protein (481aa)
Ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4W3_9PROT
Ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion protein {ECO:0000313|EMBL:CAM77920.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Putative ABC transporter, urea, permease protein, UrtB
Montesol18-Sp2_coassembly_scaffold_175196_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2153..3064
-----------------
DNA (912bp)
protein (304aa)
Permease of ABC transporter n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4W2_9PROT
Amino acid ABC transporter permease {ECO:0000313|EMBL:EWY40310.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Putative ABC transporter, urea, permease protein, UrtC
Montesol18-Sp2_coassembly_scaffold_175196_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3061..3879
-----------------
DNA (819bp)
protein (273aa)
Urea ABC transporter, ATPase protein UrtD n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HA61_9PROT
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY40309.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ABC transporter ATP-binding protein
Montesol18-Sp2_coassembly_scaffold_175196_6
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3882..4577
-----------------
DNA (696bp)
protein (232aa)
Urea ABC transporter, ATPase protein UrtE n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GQP3_9PROT
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS34010.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
urea ABC transporter ATP-binding protein
Montesol18-Sp2_coassembly_scaffold_175196_7
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4579..5436
-----------------
DNA (858bp)
protein (286aa)
Urease accessory protein UreD n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z936_AZOL4
ureD; Urease accessory protein UreD
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_175196_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5454..5756
-----------------
DNA (303bp)
protein (101aa)
ureA; urease subunit gamma (EC:3.5.1.5)
Urease subunit gamma n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GND1_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_175196_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5767..6078
-----------------
DNA (312bp)
protein (104aa)
ureB; Urease beta subunit (Urea amidohydrolase) (EC:3.5.1.5)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Urease subunit beta n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJM7_RHOPH
Montesol18-Sp2_coassembly_scaffold_175196_10
unknown

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6083..7795
-----------------
DNA (1713bp)
protein (571aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
ureC; Urease alpha subunit (Urea amidohydrolase) (EC:3.5.1.5)
Urease subunit alpha n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y141_9PROT
Montesol18-Sp2_coassembly_scaffold_175196_11
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7798..8292
-----------------
DNA (495bp)
protein (165aa)
Urease accessory protein UreE n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSE3_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_175196_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8261..8965
-----------------
DNA (705bp)
protein (235aa)
Urease accessory protein UreF n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSE4_9PROT
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_175196_13
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8962..9600
-----------------
DNA (639bp)
protein (213aa)
Urease accessory protein UreG n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LX04_HALO1
urease accessory protein UreG
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Montesol18-Sp2_coassembly_scaffold_175196_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9653..10048)
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000368D4C2
Uncharacterized protein {ECO:0000313|EMBL:ENN89503.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
alpha/beta hydrolase
Montesol18-Sp2_coassembly_scaffold_175196_15
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10117..10290)
-----------------
DNA (174bp)
protein (58aa)
Uncharacterized protein (Fragment) n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B9H3_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ERI51836.1}; Flags: Fragment;; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
alpha/beta hydrolase fold protein
Montesol18-Sp2_coassembly_scaffold_175196_trna_1
unknown

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comp(10421..10491)
-----------------
DNA (71bp)
transferRNA Gln
Montesol18-Sp2_coassembly_scaffold_175196_16
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10733..11728
-----------------
DNA (996bp)
protein (332aa)
Exopolyphosphatase {ECO:0000313|EMBL:CBS87375.1}; EC=3.6.1.11 {ECO:0000313|EMBL:CBS87375.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Exopolyphosphatase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8T1_AZOL4
ppx; exopolyphosphatase
Montesol18-Sp2_coassembly_scaffold_175196_17
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11725..12429
-----------------
DNA (705bp)
protein (235aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
ftsJ; Ribosomal RNA large subunit (23S) methyltransferase (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y144_9PROT
Montesol18-Sp2_coassembly_scaffold_175196_18
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12426..12902)
-----------------
DNA (477bp)
protein (159aa)
Putative uncharacterized protein id=3203005 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Protein-S-isoprenylcysteine methyltransferase {ECO:0000313|EMBL:KDP76442.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Protein-S-isoprenylcysteineO-methyltransferase
Montesol18-Sp2_coassembly_scaffold_175196_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13017..13874)
-----------------
DNA (858bp)
protein (286aa)
Predicted nucleotide-diphosphate-sugar epimerase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G986_SORC5
nucleotide-diphosphate-sugar epimerase
Predicted nucleotide-diphosphate-sugar epimerase {ECO:0000313|EMBL:CAN99140.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Montesol18-Sp2_coassembly_scaffold_175196_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13878..14741)
-----------------
DNA (864bp)
protein (288aa)
Predicted nucleotide-diphosphate-sugar epimerase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G986_SORC5
nucleotide-diphosphate-sugar epimerase
Predicted nucleotide-diphosphate-sugar epimerase {ECO:0000313|EMBL:CAN99140.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Montesol18-Sp2_coassembly_scaffold_175196_21
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(14787..15146)
-----------------
DNA (360bp)
protein (120aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LGK3_FRASN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABW09942.1}; Flags: Precursor;; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Montesol18-Sp2_coassembly_scaffold_175196_22
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15353..15991
-----------------
DNA (639bp)
protein (213aa)
Bacterial regulatory protein, TetR family protein 3 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHF4_ACHXA
TetR family transcriptional regulator {ECO:0000313|EMBL:KJK04894.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
TetR family transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_175196_23
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16019..16276)
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EM18_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Montesol18-Sp2_coassembly_scaffold_175196_24
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16489..17952
-----------------
DNA (1464bp)
protein (488aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K019_9PROT
guaB; Inosine-5'-monophosphate dehydrogenase
Montesol18-Sp2_coassembly_scaffold_175196_25
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17960..19300
-----------------
DNA (1341bp)
protein (447aa)
tRNA and rRNA cytosine-C5-methylase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQ69_RHOCS
rRNA cytosine-C5-methylase {ECO:0000313|EMBL:KJB92208.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
tRNA and rRNA cytosine-C5-methylase
Montesol18-Sp2_coassembly_scaffold_175196_26
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19405..19929
-----------------
DNA (525bp)
protein (175aa)
Putative acetyl-transferase n=1 Tax=Geobacillus sp. GHH01 RepID=L7ZUT9_9BACI
GNAT family acetyltransferase {ECO:0000313|EMBL:EWY41951.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
yuaI; putative acetyl-transferase
Montesol18-Sp2_coassembly_scaffold_175196_27
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19967..21514
-----------------
DNA (1548bp)
protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AR59_AZOBR
guaA; GMP synthase (glutamine-hydrolyzing)
Displaying 28 items

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