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Montesol18-Sp2_coassembly_scaffold_81406

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_81406_1
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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94..1113
-----------------
DNA (1020bp)
protein (340aa)
TRAP-type transport system, periplasmic component n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZM96_9PROT
TRAP transporter solute receptor TAXI family {ECO:0000313|EMBL:KIL97559.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
TRAP-type transport system, periplasmic component
Montesol18-Sp2_coassembly_scaffold_81406_2
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1131..1802)
-----------------
DNA (672bp)
protein (224aa)
gst; glutathione S-transferase (EC:2.5.1.18)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000365EDAE
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
Montesol18-Sp2_coassembly_scaffold_81406_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1935..3332
-----------------
DNA (1398bp)
protein (466aa)
Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
pepB; leucyl aminopeptidase (EC:3.4.11.23)
Leucyl aminopeptidase PepB, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPL5_RHOCS
Montesol18-Sp2_coassembly_scaffold_81406_4
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3355..3699
-----------------
DNA (345bp)
protein (115aa)
Transcriptional regulator, MarR family protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPL6_RHOCS
transcriptional regulator, MarR family protein
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:ACI99718.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_81406_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3850..4872
-----------------
DNA (1023bp)
protein (341aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWU6_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:EWY37892.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_81406_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4850..5590)
-----------------
DNA (741bp)
protein (247aa)
2-hydroxyacid dehydrogenase (EC:1.-.-.-)
2-hydroxyacid dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5J5_9PROT
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EKE78326.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Montesol18-Sp2_coassembly_scaffold_81406_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5590..7233)
-----------------
DNA (1644bp)
protein (548aa)
Oligopeptide ABC transporter, ATP-binding components n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIM6_AZOBR
oligopeptide ABC transporter, ATP-binding components
Oligopeptide ABC transporter, ATP-binding components {ECO:0000313|EMBL:CCC97088.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Montesol18-Sp2_coassembly_scaffold_81406_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7245..8294)
-----------------
DNA (1050bp)
protein (350aa)
Peptide/nickel transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRN4_AZOS1
ABC transporter permease {ECO:0000313|EMBL:KJB93907.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ABC transporter permease
Montesol18-Sp2_coassembly_scaffold_81406_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8298..9413)
-----------------
DNA (1116bp)
protein (372aa)
Oligopeptide ABC transporter, permease component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIN0_AZOBR
oligopeptide ABC transporter, permease component
Oligopeptide ABC transporter, permease component {ECO:0000313|EMBL:CCC97092.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Montesol18-Sp2_coassembly_scaffold_81406_10
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9438..11327)
-----------------
DNA (1890bp)
protein (630aa)
Oligopeptide ABC transporter, periplasmic component n=1 Tax=Oceanibaculum indicum P24 RepID=K2JUV4_9PROT
oligopeptide ABC transporter, periplasmic component
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Montesol18-Sp2_coassembly_scaffold_81406_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11485..12276)
-----------------
DNA (792bp)
protein (264aa)
Inositol monophosphatase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRN9_AZOS1
Histidinol phosphate phosphatase {ECO:0000313|EMBL:KJR65766.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
inositol monophosphatase
Montesol18-Sp2_coassembly_scaffold_81406_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12430..13068)
-----------------
DNA (639bp)
protein (213aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KJB91764.1}; EC=1.1.1.157 {ECO:0000313|EMBL:KJB91764.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYM6_AZOBR
Montesol18-Sp2_coassembly_scaffold_81406_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13123..14064)
-----------------
DNA (942bp)
protein (314aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5Z2_9PROT
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:EKE78294.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
electron transfer flavoprotein
Montesol18-Sp2_coassembly_scaffold_81406_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14066..14815)
-----------------
DNA (750bp)
protein (250aa)
Electron transfer flavoprotein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLK3_9PROT
Electron transfer flavoprotein {ECO:0000313|EMBL:EKE78295.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
etfB; electron transfer flavoprotein beta-subunit
Montesol18-Sp2_coassembly_scaffold_81406_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14973..15833)
-----------------
DNA (861bp)
protein (287aa)
ATP:cob(I)alamin adenosyltransferase involved in cofactor biosynthesis for adenosylcobalamin-dependent methylmalonyl-CoA mutase {ECO:0000313|EMBL:CCD00114.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CCD00114.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
ATP:cob(I)alamin adenosyltransferase involved in cofactor biosynthesis for adenosylcobalamin-dependent methylmalonyl-CoA mutase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARQ3_AZOBR
meaD; ATP:cob(I)alamin adenosyltransferase involved in cofactor biosynthesis for adenosylcobalamin-dependent methylmalonyl-CoA mutase
Montesol18-Sp2_coassembly_scaffold_81406_16
Serratia sp. Ag1, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15830..16273)
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein n=1 Tax=Enterobacter agglomerans RepID=UPI00026D25D1
Ribonuclease N {ECO:0000313|EMBL:KFK98625.1}; TaxID=1524467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. Ag1.;"
ribonuclease
Montesol18-Sp2_coassembly_scaffold_81406_17
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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16384..16899
-----------------
DNA (516bp)
protein (172aa)
Redoxin n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KLK0_9PROT
peroxiredoxin
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Montesol18-Sp2_coassembly_scaffold_81406_18
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16915..17943)
-----------------
DNA (1029bp)
protein (343aa)
Acyl-CoA dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYV6_AZOBR
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AIB16167.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_81406_19
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17931..18470)
-----------------
DNA (540bp)
protein (180aa)
Acyl-CoA dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYV6_AZOBR
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AIB16167.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_81406_20
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18604..19524)
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FKQ2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ERP85887.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
beta-lactamase-like domain-containing protein
Montesol18-Sp2_coassembly_scaffold_81406_21
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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19619..20485
-----------------
DNA (867bp)
protein (289aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036DBDDB
transcriptional regulator, LysR family protein
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:AEV36703.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
Montesol18-Sp2_coassembly_scaffold_81406_22
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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20625..21470
-----------------
DNA (846bp)
protein (282aa)
NTP pyrophosphohydrolase including oxidative damage repair enzyme n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZN37_9PROT
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:KFB77733.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
DNA mismatch repair protein MutT
Montesol18-Sp2_coassembly_scaffold_81406_23
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21653..22129)
-----------------
DNA (477bp)
protein (159aa)
Putative phage repressor n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AKN7_PELPD
putative phage repressor
Putative phage repressor {ECO:0000313|EMBL:ABK97907.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
Displaying 23 items

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