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Montesol18-Sp2_coassembly_scaffold_20100

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_20100_1
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..383)
-----------------
DNA (381bp)
protein (127aa)
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AH16_9PROT
DNA-directed RNA polymerase subunit omega
Montesol18-Sp2_coassembly_scaffold_20100_2
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(465..917)
-----------------
DNA (453bp)
protein (151aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ACI98905.1}; EC=2.7.6.3 {ECO:0000313|EMBL:ACI98905.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN08_RHOCS
Montesol18-Sp2_coassembly_scaffold_20100_3

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1070..1663
-----------------
DNA (594bp)
protein (198aa)
Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JB77_9BACT
Conserved uncharacterized protein {ECO:0000313|EMBL:CAX84020.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_20100_4
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1660..2349
-----------------
DNA (690bp)
protein (230aa)
Uracil-DNA glycosylase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W521_MAGSA
Uracil-DNA glycosylase
Uracil-DNA glycosylase {ECO:0000313|EMBL:BAE51054.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Montesol18-Sp2_coassembly_scaffold_20100_5
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

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comp(2336..2980)
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003779EE1
RNA methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Montesol18-Sp2_coassembly_scaffold_20100_6
unknown

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3065..3274
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_20100_7
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3271..4521
-----------------
DNA (1251bp)
protein (417aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NIV2_RALSL
conserved protein of unknown function, radical SAM domain
Uncharacterized protein {ECO:0000313|EMBL:CBJ42974.1}; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;"
Montesol18-Sp2_coassembly_scaffold_20100_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4518..4739
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P3Y2_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI75361.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_20100_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4736..5206)
-----------------
DNA (471bp)
protein (157aa)
SsrA-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHK6_AFIFE
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
smpB; SsrA-binding protein
Montesol18-Sp2_coassembly_scaffold_20100_10
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5209..6084)
-----------------
DNA (876bp)
protein (292aa)
dihydrodipicolinate synthase (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QTX2_9RHIZ
Tax=RBG_16_Alphaproteobacteria_64_48_curated
Montesol18-Sp2_coassembly_scaffold_20100_11
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6293..8305
-----------------
DNA (2013bp)
protein (671aa)
Lytic murein transglycosylase family protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN14_RHOCS
lytic murein transglycosylase family protein
Lytic murein transglycosylase family protein {ECO:0000313|EMBL:ACI98911.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_20100_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8334..9023
-----------------
DNA (690bp)
protein (230aa)
Haloacid dehalogenase, type II n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEW2_ANASK
haloacid dehalogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Montesol18-Sp2_coassembly_scaffold_20100_13
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9020..9865
-----------------
DNA (846bp)
protein (282aa)
Alpha/beta hydrolase fold protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLW1_9PROT
Conserved protein of unknown function, Containing alpha/beta hydrolase fold 1 domain
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_20100_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9843..10850
-----------------
DNA (1008bp)
protein (336aa)
Serine/threonine dehydratase {ECO:0000313|EMBL:KJB97083.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KJB97083.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Threonine dehydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTE3_9PROT
pyridoxal-5'-phosphate-dependent protein
Montesol18-Sp2_coassembly_scaffold_20100_15
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10860..11939
-----------------
DNA (1080bp)
protein (360aa)
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B24C7
2Fe-2S iron-sulfur cluster binding domain protein
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:KGW04047.1}; TaxID=1435370 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR4000.;"
Montesol18-Sp2_coassembly_scaffold_20100_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11936..12541)
-----------------
DNA (606bp)
protein (202aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A088
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KCV61117.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
TetR family transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_20100_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12563..13657)
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=9 Tax=Burkholderia pseudomallei RepID=S5NZN4_BURPE
Uncharacterized protein {ECO:0000313|EMBL:ETW94317.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_20100_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13936..14244
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0Q3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EWY39333.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_20100_19
unknown

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14222..14356
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_20100_20
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14451..16226
-----------------
DNA (1776bp)
protein (592aa)
Citrate transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2K633_9PROT
Citrate transporter {ECO:0000313|EMBL:EKE78334.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
citrate transporter
Montesol18-Sp2_coassembly_scaffold_20100_21
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16245..16760
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTV8_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63341.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Montesol18-Sp2_coassembly_scaffold_20100_22
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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16808..19420
-----------------
DNA (2613bp)
protein (871aa)
Amino acid permease n=1 Tax=delta proteobacterium NaphS2 RepID=D8EWU7_9DELT
Amino acid permease {ECO:0000313|EMBL:EFK11977.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
amino acid permease-associated protein
Montesol18-Sp2_coassembly_scaffold_20100_23

Not on your lists

19612..20448
-----------------
DNA (837bp)
protein (279aa)
Marine sediment metagenome DNA, contig: S01H4_C04187 {ECO:0000313|EMBL:GAG67616.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 23 items

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