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Montesol18-Sp2_coassembly_scaffold_224070

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_224070_1
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..444)
-----------------
DNA (444bp)
protein (148aa)
Flagellar basal body P-ring biosynthesis protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FPS1_PHAMO
Flagellar basal body P-ring biosynthesis protein {ECO:0000313|EMBL:CCG40359.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
flgA; flagellar basal body P-ring biosynthesis protein FlgA
Montesol18-Sp2_coassembly_scaffold_224070_2
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(463..1248)
-----------------
DNA (786bp)
protein (262aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT34_RHOCS
flgG; flagellar basal body rod protein FlgG
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Montesol18-Sp2_coassembly_scaffold_224070_3
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1274..1963)
-----------------
DNA (690bp)
protein (230aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANH1_AZOBR
flgF; flagellar basal-body rod protein FlgF
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
Montesol18-Sp2_coassembly_scaffold_224070_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2033..2599
-----------------
DNA (567bp)
protein (189aa)
Flagellar basal body-associated protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KCH6_9PROT
Flagellar basal body-associated protein {ECO:0000313|EMBL:EKE75015.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
flagellar basal body protein FliL
Montesol18-Sp2_coassembly_scaffold_224070_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2628..3737
-----------------
DNA (1110bp)
protein (370aa)
Flagellar motor switch protein FliM n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVN6_9PROT
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
flagellar motor switch protein FliM
Montesol18-Sp2_coassembly_scaffold_224070_6
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3734..4165
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000367F54F
hypothetical protein
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
Montesol18-Sp2_coassembly_scaffold_224070_7
unknown

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comp(4122..4838)
-----------------
DNA (717bp)
protein (239aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_224070_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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4846..5043
-----------------
DNA (198bp)
protein (66aa)
CheY-like receiver protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPN9_9PROT
CheY-like receiver protein {ECO:0000313|EMBL:EDP65276.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
FOG: CheY-like receiver
Montesol18-Sp2_coassembly_scaffold_224070_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5055..5717
-----------------
DNA (663bp)
protein (221aa)
Putative chemotaxis protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANG4_AZOBR
putative chemotaxis protein
Putative chemotaxis protein {ECO:0000313|EMBL:CCC98776.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Montesol18-Sp2_coassembly_scaffold_224070_10
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5728..6396
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H7X8_9PROT
PPE-repeat protein (cell mobility)
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Montesol18-Sp2_coassembly_scaffold_224070_11
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6393..7121
-----------------
DNA (729bp)
protein (243aa)
chemotaxis protein MotB n=1 Tax=Thalassospira lucentensis RepID=UPI0003B7022E
putative Flagellar motor protein MotB
Putative Flagellar motor protein MotB {ECO:0000313|EMBL:CCQ74117.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Montesol18-Sp2_coassembly_scaffold_224070_12
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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7121..10177
-----------------
DNA (3057bp)
protein (1019aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPN4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP65272.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Conserved exported protein of unknown function
Montesol18-Sp2_coassembly_scaffold_224070_13
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

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10750..11208
-----------------
DNA (459bp)
protein (153aa)
Transcriptional regulatory protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0THK3_PARBH
transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:ADM09299.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;"
Montesol18-Sp2_coassembly_scaffold_224070_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11366..12064
-----------------
DNA (699bp)
protein (233aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036435E8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIB10938.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_224070_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(12079..13038)
-----------------
DNA (960bp)
protein (320aa)
Streptogramin lyase id=3139741 bin=GWF2_Methylomirabilis_70_14 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
streptogramin lyase
Tax=GWA2_Rokubacteria_70_23_curated
Montesol18-Sp2_coassembly_scaffold_224070_16
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13328..14413
-----------------
DNA (1086bp)
protein (362aa)
Protein RecA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANE3_AZOBR
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
recA; recombinase A (recA)
Montesol18-Sp2_coassembly_scaffold_224070_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14748..17483
-----------------
DNA (2736bp)
protein (912aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IS94_RHOCS
Montesol18-Sp2_coassembly_scaffold_224070_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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17525..18346
-----------------
DNA (822bp)
protein (274aa)
Ion transport protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRG8_9RHOB
potassium channel protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Montesol18-Sp2_coassembly_scaffold_224070_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18583..19188
-----------------
DNA (606bp)
protein (202aa)
Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily id=4748854 bin=GWC2_Methylomirabilis_70_16 species=Microbacterium laevaniformans genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
Montesol18-Sp2_coassembly_scaffold_224070_20
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19219..20433)
-----------------
DNA (1215bp)
protein (405aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase [NADP] n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZLX7_9PROT
Montesol18-Sp2_coassembly_scaffold_224070_21
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20579..21163)
-----------------
DNA (585bp)
protein (195aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RXI3_RHORT
Lysine decarboxylase {ECO:0000313|EMBL:EWY37129.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_224070_22
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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21360..21836
-----------------
DNA (477bp)
protein (159aa)
Cytochrome c n=1 Tax=Sphingomonas sp. LH128 RepID=J8SBV2_9SPHN
Cytochrome C {ECO:0000313|EMBL:KHK93281.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
cytochrome C, class II
Montesol18-Sp2_coassembly_scaffold_224070_23
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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21860..22855
-----------------
DNA (996bp)
protein (332aa)
Cytochrome c n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9H6_ALKEH
cytochrome c
Tax=RBG_16_Gamma2_64_10_curated
Montesol18-Sp2_coassembly_scaffold_224070_24
unknown

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22950..23216
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035D3B44
Displaying 24 items

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