ggKbase home page

Montesol18-Sp2_coassembly_scaffold_432134

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_432134_1
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..283
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X8I7_RHIFR
transcriptional regulator protein
Transcriptional regulator protein {ECO:0000313|EMBL:AJD41643.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
Montesol18-Sp2_coassembly_scaffold_432134_2
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(324..1028)
-----------------
DNA (705bp)
protein (235aa)
Glutathione S-transferase family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZL8_9RHOB
Glutathione S-transferase family protein {ECO:0000313|EMBL:EAQ02499.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
glutathione S-transferase
Montesol18-Sp2_coassembly_scaffold_432134_3
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1126..1563
-----------------
DNA (438bp)
protein (146aa)
Transcriptional regulator, MarR family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZL6_9RHOB
MarR family transcriptional regulator {ECO:0000313|EMBL:KJS18343.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
transcriptional regulator, MarR family
Montesol18-Sp2_coassembly_scaffold_432134_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1652..1933)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R7Z1_9DELT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_432134_5
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2098..3717)
-----------------
DNA (1620bp)
protein (540aa)
SSS sodium solute transporter superfamily n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LTR7_DINSH
SSS family solute/sodium (Na+) symporter
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ABV95634.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
Montesol18-Sp2_coassembly_scaffold_432134_6
unknown

Not on your lists

3881..4117
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_432134_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5211..6221)
-----------------
DNA (1011bp)
protein (337aa)
Fatty acid desaturase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWF8_TISMK
fatty acid desaturase
Fatty acid desaturase {ECO:0000313|EMBL:AFK57096.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Montesol18-Sp2_coassembly_scaffold_432134_8

Not on your lists

comp(6842..7336)
-----------------
DNA (495bp)
protein (165aa)
Activator of Hsp90 ATPase n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PV00_PSEUV
Uncharacterized protein {ECO:0000313|EMBL:KKN80921.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Activator of Hsp90 ATPase
Montesol18-Sp2_coassembly_scaffold_432134_9

Not on your lists

comp(7329..7700)
-----------------
DNA (372bp)
protein (124aa)
ArsR family transcriptional regulator n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PUZ9_PSEUV
Uncharacterized protein {ECO:0000313|EMBL:KKN80920.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ArsR family transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_432134_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7749..8279)
-----------------
DNA (531bp)
protein (177aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC7_9BACT
activator of Hsp90 ATPase 1 family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Montesol18-Sp2_coassembly_scaffold_432134_11

Not on your lists

comp(8315..8806)
-----------------
DNA (492bp)
protein (164aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACN58813.1}; TaxID=506525 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR9.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_432134_12
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(8790..9140)
-----------------
DNA (351bp)
protein (117aa)
Transcriptional regulator, ArsR family n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J5G5_HYPSM
ArsR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Montesol18-Sp2_coassembly_scaffold_432134_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9280..9675)
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D213_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:AHY54816.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_432134_14
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9917..10129
-----------------
DNA (213bp)
protein (71aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W1X3_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE52152.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Montesol18-Sp2_coassembly_scaffold_432134_15
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10220..11092)
-----------------
DNA (873bp)
protein (291aa)
3-beta hydroxysteroid dehydrogenase/isomerase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4U9_9PROT
3-beta hydroxysteroid dehydrogenase/isomerase family protein {ECO:0000313|EMBL:EHL97926.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
NADH-ubiquinone oxidoreductase 39-40 kDa subunit
Montesol18-Sp2_coassembly_scaffold_432134_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11182..11604)
-----------------
DNA (423bp)
protein (141aa)
Protein chain release factor B n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX68_9PROT
Protein chain release factor B {ECO:0000313|EMBL:CAM75225.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
putative Class I peptide chain release factor domain protein
Montesol18-Sp2_coassembly_scaffold_432134_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11708..12217)
-----------------
DNA (510bp)
protein (170aa)
5'-nucleotidase/2' 3'-cyclic phosphodiesterase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIF4_THIDA
5'-nucleotidase/2' 3'-cyclic phosphodiesterase
5'-nucleotidase/2' 3'-cyclic phosphodiesterase {ECO:0000313|EMBL:AAZ97574.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 17 items

View Taxonomy