ggKbase home page

Montesol18-Sp2_coassembly_scaffold_386616

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_386616_1
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..922)
-----------------
DNA (921bp)
protein (307aa)
Oxidoreductase FAD-binding subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMU0_TISMK
ndoR; oxidoreductase FAD-binding subunit
Oxidoreductase FAD-binding subunit {ECO:0000313|EMBL:AFK54078.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Montesol18-Sp2_coassembly_scaffold_386616_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1063..1572
-----------------
DNA (510bp)
protein (170aa)
Putative transcriptional regulator, MarR family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGC2_AZOBR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIB13047.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_386616_3
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1649..3196
-----------------
DNA (1548bp)
protein (516aa)
Long-chain-fatty-acid-CoA ligase n=1 Tax=Nitratireductor indicus C115 RepID=K2PRW8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EWH02525.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
AMP-dependent synthetase and ligase
Montesol18-Sp2_coassembly_scaffold_386616_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3477..3944)
-----------------
DNA (468bp)
protein (156aa)
UPI0003D3D76C related cluster n=1 Tax=unknown RepID=UPI0003D3D76C
Uncharacterized protein {ECO:0000313|EMBL:GAD23998.1}; Flags: Fragment;; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ligA; LigA protein
Montesol18-Sp2_coassembly_scaffold_386616_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4250..4546
-----------------
DNA (297bp)
protein (99aa)
Aldehyde dehydrogenase n=1 Tax=Pseudomonas sp. Ag1 RepID=J0PMN6_9PSED
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:ESW57013.1}; TaxID=463794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BBc6R8.;"
aldehyde dehydrogenase
Montesol18-Sp2_coassembly_scaffold_386616_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4573..5328
-----------------
DNA (756bp)
protein (252aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EKE67437.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EKE67437.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IXT3_9PROT
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Montesol18-Sp2_coassembly_scaffold_386616_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5357..6481
-----------------
DNA (1125bp)
protein (375aa)
Zn-dependent alcohol dehydrogenase, class III n=1 Tax=Pseudomonas sp. GM78 RepID=J2XBF4_9PSED
alcohol dehydrogenase
Tax=CG_Rhodocyc_01
Montesol18-Sp2_coassembly_scaffold_386616_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6556..7275)
-----------------
DNA (720bp)
protein (240aa)
Integral membrane protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KJ07_9PROT
Integral membrane protein {ECO:0000313|EMBL:EKE77245.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_386616_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7432..9948)
-----------------
DNA (2517bp)
protein (839aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTY1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63822.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
glycosyl transferase family 1
Montesol18-Sp2_coassembly_scaffold_386616_10
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9945..10685)
-----------------
DNA (741bp)
protein (247aa)
Putative ABC transporter, ATPase component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGZ1_AZOBR
putative ABC transporter, ATPase component
Putative ABC transporter, ATPase component {ECO:0000313|EMBL:CCC96710.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Montesol18-Sp2_coassembly_scaffold_386616_11
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10861..11400
-----------------
DNA (540bp)
protein (180aa)
Multifunctional: acyl-CoA thioesterase I protease I lysophospholipaseL(I) {ECO:0000313|EMBL:CCG42973.1}; EC=3.1.1.5 {ECO:0000313|EMBL:CCG42973.1};; EC=3.1.2.- {ECO:0000313|EMBL:CCG42973.1};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
lipolytic protein (EC:3.1.1.2)
Multifunctional: acyl-CoA thioesterase I protease I lysophospholipaseL(I) n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FX85_PHAMO
Montesol18-Sp2_coassembly_scaffold_386616_12
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11509..11796)
-----------------
DNA (288bp)
protein (96aa)
RNA-binding region RNP-1 id=1899185 bin=GWB2_Desulfobacterales_56_26 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
RNP-1 like RNA-binding protein
Tax=GWB2_Desulfobacterales_56_26_curated
Montesol18-Sp2_coassembly_scaffold_386616_13
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12242..13411
-----------------
DNA (1170bp)
protein (390aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGZ3_AZOBR
Histidine kinase {ECO:0000313|EMBL:EWY37881.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_386616_14
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13524..14507
-----------------
DNA (984bp)
protein (328aa)
Aldo/keto reductase n=1 Tax=Thiocapsa marina 5811 RepID=F9U941_9GAMM
Aldo/keto reductase {ECO:0000313|EMBL:EGV19299.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
aldo/keto reductase
Montesol18-Sp2_coassembly_scaffold_386616_15
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14595..15140
-----------------
DNA (546bp)
protein (182aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
2'-5' RNA ligase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z421_AZOL4
2'-5' RNA ligase
Montesol18-Sp2_coassembly_scaffold_386616_16
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15155..16006)
-----------------
DNA (852bp)
protein (284aa)
Fructosamine kinase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYC9_9PROT
putative Aminoglycoside phosphotransferase
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
Montesol18-Sp2_coassembly_scaffold_386616_17
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16003..16515)
-----------------
DNA (513bp)
protein (171aa)
Protein-tyrosine-phosphatase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZRS5_9PROT
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:EME70042.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
protein-tyrosine-phosphatase
Montesol18-Sp2_coassembly_scaffold_386616_18
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16530..17243
-----------------
DNA (714bp)
protein (238aa)
NAD-dependent deacetylase (EC:3.5.1.-)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
NAD-dependent protein deacylase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVE2_RHOCS
Montesol18-Sp2_coassembly_scaffold_386616_19
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17240..17830
-----------------
DNA (591bp)
protein (197aa)
Uracil-DNA glycosylase protein (EC:3.2.2.-)
Uracil-DNA glycosylase protein {ECO:0000313|EMBL:CCQ72078.1}; EC=3.2.2.- {ECO:0000313|EMBL:CCQ72078.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
IclR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5158B
Montesol18-Sp2_coassembly_scaffold_386616_20
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17839..18264)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037F63A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ48676.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
Montesol18-Sp2_coassembly_scaffold_386616_21
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18279..18698)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVP2_RHOCS
Neutral zinc metallopeptidase {ECO:0000313|EMBL:KJB95486.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_386616_22
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18783..19070
-----------------
DNA (288bp)
protein (96aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q1Y2_9RHOO
pterin-4-alpha-carbinolamine dehydratase
Montesol18-Sp2_coassembly_scaffold_386616_23
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19081..19842)
-----------------
DNA (762bp)
protein (254aa)
3-hydroxyacyl-CoA dehydrogenase (Short-chain) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6A3_AZOL4
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGF69833.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
3-hydroxyacyl-CoA dehydrogenase
Montesol18-Sp2_coassembly_scaffold_386616_24
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19943..20371
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3B8B1
Uncharacterized protein {ECO:0000313|EMBL:EWY40498.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_386616_25
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20318..21292)
-----------------
DNA (975bp)
protein (325aa)
Integral membrane protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUG8_RHOCS
integral membrane protein
Integral membrane protein, putative {ECO:0000313|EMBL:ACI99793.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_386616_26
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21297..22232)
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HUG8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV31896.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
integral membrane protein
Montesol18-Sp2_coassembly_scaffold_386616_27
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22225..23262)
-----------------
DNA (1038bp)
protein (346aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036BBD7A
Membrane protein {ECO:0000313|EMBL:KJB95491.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
integral membrane protein
Montesol18-Sp2_coassembly_scaffold_386616_28
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23454..25430
-----------------
DNA (1977bp)
protein (659aa)
Acetoacetyl-CoA synthetase {ECO:0000313|EMBL:EKE74767.1}; EC=6.2.1.16 {ECO:0000313|EMBL:EKE74767.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
acetoacetyl-CoA synthetase (EC:6.2.1.1)
Acetoacetyl-CoA synthetase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JK04_9PROT
Montesol18-Sp2_coassembly_scaffold_386616_29
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25437..26654)
-----------------
DNA (1218bp)
protein (406aa)
Membrane protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LLC0_RUEPO
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AAV97245.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
Montesol18-Sp2_coassembly_scaffold_386616_30
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26808..27314
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NEX8_RHISP
Diguanylate cyclase {ECO:0000313|EMBL:EWY42413.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Conserved protein of unknown function,putative DinB family protein
Displaying items 1-30 of 39 in total

View Taxonomy