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Montesol18-Sp2_coassembly_scaffold_451428

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_451428_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(89..949)
-----------------
DNA (861bp)
protein (287aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LEB3_9GAMM
17-beta-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KGT75664.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
short-chain dehydrogenase/reductase SDR
Montesol18-Sp2_coassembly_scaffold_451428_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1032..1556)
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BA48_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56975.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Montesol18-Sp2_coassembly_scaffold_451428_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1796..2467
-----------------
DNA (672bp)
protein (224aa)
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D5G9_SINAD
hypothetical protein
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding {ECO:0000313|EMBL:AGA24497.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Montesol18-Sp2_coassembly_scaffold_451428_4
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2556..3461
-----------------
DNA (906bp)
protein (302aa)
LysR family transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLI7_TISMK
ptxR; LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFK53625.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Montesol18-Sp2_coassembly_scaffold_451428_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3466..4137)
-----------------
DNA (672bp)
protein (224aa)
Glutathione S-transferase n=1 Tax=Variovorax sp. CF313 RepID=J3CEW4_9BURK
Glutathione S-transferase {ECO:0000313|EMBL:AKF09524.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
glutathione S-transferase domain-containing protein
Montesol18-Sp2_coassembly_scaffold_451428_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4491..4982
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BI01_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07954.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Montesol18-Sp2_coassembly_scaffold_451428_trna_1
unknown

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comp(5274..5360)
-----------------
DNA (87bp)
transferRNA Ser
Montesol18-Sp2_coassembly_scaffold_451428_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5540..5860
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KMZ2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78905.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_451428_8
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5895..7514)
-----------------
DNA (1620bp)
protein (540aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Elongation factor 4 n=1 Tax=Acidiphilium sp. PM RepID=F7S2M9_9PROT
GTP-binding protein LepA
Montesol18-Sp2_coassembly_scaffold_451428_9

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comp(7592..8092)
-----------------
DNA (501bp)
protein (167aa)
Putative uncharacterized protein pyr14 n=1 Tax=Streptomyces vitaminophilus RepID=A3R4Q5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KKN21762.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_451428_10

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comp(8086..8781)
-----------------
DNA (696bp)
protein (232aa)
Transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBU7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKK63479.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TetR family transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_451428_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8917..10068
-----------------
DNA (1152bp)
protein (384aa)
Putative RND efflux transporter, MFP subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APY6_AZOBR
Secretion protein HylD {ECO:0000313|EMBL:EWY41115.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative RND efflux transporter, MFP subunit
Montesol18-Sp2_coassembly_scaffold_451428_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10110..13199
-----------------
DNA (3090bp)
protein (1030aa)
Acriflavin resistance protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GX52_9PROT
Acriflavin resistance protein {ECO:0000313|EMBL:KJB95174.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hydrophobic/amphiphilic exporter-1
Montesol18-Sp2_coassembly_scaffold_451428_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13280..13945
-----------------
DNA (666bp)
protein (222aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244, ECO:0000313|EMBL:CCC97149.1};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIT7_AZOBR
putative nicotinate-nucleotide adenylyltransferase (NadD-like)
Montesol18-Sp2_coassembly_scaffold_451428_14
unknown

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13987..14106
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

Displaying 15 items

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