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Montesol18-Sp2_coassembly_scaffold_885700

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_885700_1
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1601)
-----------------
DNA (1599bp)
protein (533aa)
paaN; aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde deshydrogenase, Phenylacetic acid degradation {ECO:0000313|EMBL:CAQ72199.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CAQ72199.1};; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
Aldehyde deshydrogenase, Phenylacetic acid degradation n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RBC4_CUPTR
Montesol18-Sp2_coassembly_scaffold_885700_2
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1668..2489)
-----------------
DNA (822bp)
protein (274aa)
Putative hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YAL8_9SPHN
alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Montesol18-Sp2_coassembly_scaffold_885700_3
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2523..3293)
-----------------
DNA (771bp)
protein (257aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GVN1_CUPNN
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Montesol18-Sp2_coassembly_scaffold_885700_4
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3280..4041)
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GVN0_CUPNN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Montesol18-Sp2_coassembly_scaffold_885700_5
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4126..5112)
-----------------
DNA (987bp)
protein (329aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GVM9_CUPNN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Montesol18-Sp2_coassembly_scaffold_885700_6
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5143..5919)
-----------------
DNA (777bp)
protein (259aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Rhizobium sp. CF080 RepID=J3CJA5_9RHIZ
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Montesol18-Sp2_coassembly_scaffold_885700_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5952..6815)
-----------------
DNA (864bp)
protein (288aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D7CFD
alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Montesol18-Sp2_coassembly_scaffold_885700_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6944..7729
-----------------
DNA (786bp)
protein (262aa)
Putative enoyl-CoA hydratase paaB n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDR1_XANP2
enoyl-CoA hydratase
Putative enoyl-CoA hydratase paaB {ECO:0000313|EMBL:ABS66154.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Montesol18-Sp2_coassembly_scaffold_885700_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7738..8199
-----------------
DNA (462bp)
protein (154aa)
Phenylacetic acid degradation protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5Q1_AZOS1
paaI; phenylacetic acid degradation protein
Phenylacetic acid degradation protein {ECO:0000313|EMBL:BAI75980.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_885700_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8210..9427
-----------------
DNA (1218bp)
protein (406aa)
Beta-ketoadipyl CoA thiolase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHB7_RHIRD
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:EGP53986.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
beta-ketoadipyl CoA thiolase
Montesol18-Sp2_coassembly_scaffold_885700_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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9670..10191
-----------------
DNA (522bp)
protein (174aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUR8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63636.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_885700_12
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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10260..11690
-----------------
DNA (1431bp)
protein (477aa)
paaK; phenylacetyl-CoA ligase (EC:6.2.1.30)
phenylacetate-CoA ligase n=1 Tax=Amorphus coralli RepID=UPI00035D918E
Tax=BJP_08E140C01_Dechloromonas_61_78
Montesol18-Sp2_coassembly_scaffold_885700_13
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11701..13368
-----------------
DNA (1668bp)
protein (556aa)
FAD binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A224_9PROT
FAD binding domain protein {ECO:0000313|EMBL:EHL99958.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase
Montesol18-Sp2_coassembly_scaffold_885700_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13381..13578
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QBA0_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF03643.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
Montesol18-Sp2_coassembly_scaffold_885700_15
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13636..14121
-----------------
DNA (486bp)
protein (162aa)
UPF0234 protein RC1_3464 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=Y3464_RHOCS
putative nucleotide-binding protein
UPF0234 protein RC1_3464 {ECO:0000255|HAMAP-Rule:MF_00632}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_885700_16
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14312..16129
-----------------
DNA (1818bp)
protein (606aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative sensor histidine kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHA4_AZOL4
putative sensor histidine kinase
Montesol18-Sp2_coassembly_scaffold_885700_17
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16154..17104)
-----------------
DNA (951bp)
protein (317aa)
putative Metallo hydrolase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289ABF4
metallo-beta-lactamase superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Montesol18-Sp2_coassembly_scaffold_885700_18
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17124..17852)
-----------------
DNA (729bp)
protein (243aa)
ABC transporter, ATP-binding protein putative branched-chain amino acid transport protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FS85_PHAMO
ABC transporter, ATP-binding protein putative branched-chain amino acid transport protein {ECO:0000313|EMBL:CCG41223.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
livF; ABC transporter, ATP-binding protein; putative branched-chain amino acid transport protein
Montesol18-Sp2_coassembly_scaffold_885700_19
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17852..18625)
-----------------
DNA (774bp)
protein (258aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) {ECO:0000313|EMBL:CCG41222.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCG41222.1};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
livG; High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) (EC:3.6.3.-)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000363ED9F
Montesol18-Sp2_coassembly_scaffold_885700_20
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18622..19578)
-----------------
DNA (957bp)
protein (319aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037F3F67
livM; branched-chain amino acid transport system permease
Branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:BAI73097.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_885700_21
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19581..20471)
-----------------
DNA (891bp)
protein (297aa)
Branched chain amino acid ABC transporter permease n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SDE5_PHAFV
branched chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Montesol18-Sp2_coassembly_scaffold_885700_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20551..21711)
-----------------
DNA (1161bp)
protein (387aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLM9_9RHIZ
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Montesol18-Sp2_coassembly_scaffold_885700_23
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21812..22285)
-----------------
DNA (474bp)
protein (158aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=QUEF_PARL1
7-cyano-7-deazaguanine reductase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Montesol18-Sp2_coassembly_scaffold_885700_24
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22309..23466)
-----------------
DNA (1158bp)
protein (386aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FU18_PHAMO
tgt; tRNA-guanine transglycosylase
Montesol18-Sp2_coassembly_scaffold_885700_25
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23463..24536)
-----------------
DNA (1074bp)
protein (358aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NWF6_AZOS1
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Montesol18-Sp2_coassembly_scaffold_885700_26
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24619..25086)
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUR8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63636.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_885700_27
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(25071..26201)
-----------------
DNA (1131bp)
protein (377aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Epoxyqueuosine reductase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KG56_9PROT
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_885700_28
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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26344..27381
-----------------
DNA (1038bp)
protein (346aa)
UDP-phosphate alpha-N-acetylglucosaminephosphotransferase (EC:2.7.8.-)
Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWM7_SYNAS
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Montesol18-Sp2_coassembly_scaffold_885700_29
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27391..29100)
-----------------
DNA (1710bp)
protein (570aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037A4BF8
PAS domain-containing protein
Montesol18-Sp2_coassembly_scaffold_885700_30
unknown

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comp(29097..29234)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

Displaying 30 items

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