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Montesol18-Sp2_coassembly_scaffold_964302

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_964302_1
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..2135)
-----------------
DNA (2133bp)
protein (711aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
glnE; glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H6C9_9PROT
Montesol18-Sp2_coassembly_scaffold_964302_2
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2243..5452
-----------------
DNA (3210bp)
protein (1070aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FRM7_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG41015.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_964302_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5464..6096)
-----------------
DNA (633bp)
protein (211aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
tyrS; tyrosyl-tRNA synthetase TyrS (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTQ3_9PROT
Montesol18-Sp2_coassembly_scaffold_964302_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6065..6676)
-----------------
DNA (612bp)
protein (204aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Tyrosine--tRNA ligase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9P7_AZOL4
tyrS1; tyrosine tRNA synthetase
Montesol18-Sp2_coassembly_scaffold_964302_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6775..7860
-----------------
DNA (1086bp)
protein (362aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INC6_RHOCS
anmK; anhydro-N-acetylmuramic acid kinase
Montesol18-Sp2_coassembly_scaffold_964302_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7968..8354)
-----------------
DNA (387bp)
protein (129aa)
Hypothetical membrane associated protein n=4 Tax=Coxiella burnetii RepID=A9KGJ0_COXBN
Uncharacterized protein {ECO:0000313|EMBL:KGM31336.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_964302_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8497..9183)
-----------------
DNA (687bp)
protein (229aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INC5_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99022.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_964302_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9422..10153
-----------------
DNA (732bp)
protein (244aa)
Serine acetyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7L1_9PROT
Serine O-acetyltransferase {ECO:0000313|EMBL:EKE78854.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
serine O-acetyltransferase
Montesol18-Sp2_coassembly_scaffold_964302_9
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10199..10672
-----------------
DNA (474bp)
protein (158aa)
Predicted transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2U1_MAGSA
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAE51834.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Montesol18-Sp2_coassembly_scaffold_964302_10
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10713..11858
-----------------
DNA (1146bp)
protein (382aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036FA4F0
iscS; cysteine desulfurase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_964302_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11875..13143
-----------------
DNA (1269bp)
protein (423aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2S5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_964302_12
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13196..13594
-----------------
DNA (399bp)
protein (133aa)
Scaffold protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M7Q6_9PROT
iscU; scaffold protein,involved in assembly of Fe-S clusters
Scaffold protein {ECO:0000313|EMBL:EKF08163.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
Montesol18-Sp2_coassembly_scaffold_964302_13
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13708..14028
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z3S2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME69020.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
iscA; FeS cluster assembly protein
Montesol18-Sp2_coassembly_scaffold_964302_14
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14132..14797
-----------------
DNA (666bp)
protein (222aa)
Putative Iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F285_9PROT
putative Iron-sulfur cluster co-chaperone protein HscB
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Montesol18-Sp2_coassembly_scaffold_964302_15
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14794..16659
-----------------
DNA (1866bp)
protein (622aa)
Chaperone protein HscA homolog n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2U7_MAGSA
hscA; chaperone protein HscA
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Montesol18-Sp2_coassembly_scaffold_964302_16
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16695..17039
-----------------
DNA (345bp)
protein (115aa)
(2Fe-2S) ferredoxin n=1 Tax=Oceanibaculum indicum P24 RepID=K2J6Y9_9PROT
fdxB; 2Fe-2S ferredoxin,involved in assembly of other Fe-S clusters
2Fe-2S ferredoxin,involved in assembly of other Fe-S clusters {ECO:0000313|EMBL:CCQ74486.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Montesol18-Sp2_coassembly_scaffold_964302_17
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17066..17266
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein n=2 Tax=Acidithiobacillus caldus RepID=C6NVH3_9GAMM
FeS assembly protein IscX
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_964302_18
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17310..18437
-----------------
DNA (1128bp)
protein (376aa)
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=MNMA_RHOCS
Montesol18-Sp2_coassembly_scaffold_964302_19
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18731..19039)
-----------------
DNA (309bp)
protein (103aa)
Branched-chain amino acid transport n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TD17_9DELT
Branched-chain amino acid transport {ECO:0000313|EMBL:EPR34450.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
putative membrane protein
Montesol18-Sp2_coassembly_scaffold_964302_20
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(19029..19736)
-----------------
DNA (708bp)
protein (236aa)
AzlC family protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0ADS1_9EURY
AzlC family protein {ECO:0000313|EMBL:ELY95997.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
AzlC family protein
Montesol18-Sp2_coassembly_scaffold_964302_trna_1
unknown

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20021..20092
-----------------
DNA (72bp)
transferRNA Met
Montesol18-Sp2_coassembly_scaffold_964302_21

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comp(20210..21187)
-----------------
DNA (978bp)
protein (326aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN12555.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase/recombinase
Montesol18-Sp2_coassembly_scaffold_964302_22
unknown

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comp(21396..21653)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_964302_23
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21650..22030)
-----------------
DNA (381bp)
protein (127aa)
Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JD98_AGRRK
Transcriptional regulator {ECO:0000313|EMBL:EWY38835.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_964302_24
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22032..23870)
-----------------
DNA (1839bp)
protein (613aa)
Predicted transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W769_MAGSA
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAE50306.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Montesol18-Sp2_coassembly_scaffold_964302_25
unknown

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comp(23908..24294)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_964302_26
unknown

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comp(24291..24659)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_964302_27
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(25217..26020)
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI0003760BFA
Uncharacterized protein {ECO:0000313|EMBL:EJZ34136.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
Restriction endonuclease, type I, EcoRI, R subunit/Type III
Montesol18-Sp2_coassembly_scaffold_964302_28
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26043..26639)
-----------------
DNA (597bp)
protein (199aa)
Putative phage repressor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ILM3_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KGM34497.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
XRE family transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_964302_29
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26738..27007
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FP48_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40136.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Displaying items 1-30 of 39 in total

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