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Montesol18-Sp2_coassembly_scaffold_989986

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_989986_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..140
-----------------
DNA (138bp)
protein (46aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:EWY40818.1}; EC=4.2.1.9 {ECO:0000313|EMBL:EWY40818.1};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
dihydroxy-acid dehydratase n=1 Tax=Xanthobacteraceae RepID=UPI000370F6F8
dihydroxy-acid dehydratase
Montesol18-Sp2_coassembly_scaffold_989986_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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146..1333
-----------------
DNA (1188bp)
protein (396aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IHD9_9PROT
Aspartate aminotransferase {ECO:0000313|EMBL:EKE69526.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Montesol18-Sp2_coassembly_scaffold_989986_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1506..2585
-----------------
DNA (1080bp)
protein (360aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89NC5_BRADU
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAC49182.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
Montesol18-Sp2_coassembly_scaffold_989986_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2632..3963
-----------------
DNA (1332bp)
protein (444aa)
Extracellular solute-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K281_9PROT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWY36682.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
extracellular solute-binding protein
Montesol18-Sp2_coassembly_scaffold_989986_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4064..5011
-----------------
DNA (948bp)
protein (316aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FEF61D
ABC transporter permease {ECO:0000313|EMBL:EWY36683.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
binding-protein-dependent transport system inner membrane protein
Montesol18-Sp2_coassembly_scaffold_989986_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5004..5903
-----------------
DNA (900bp)
protein (300aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9V8_9PROT
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EKE71597.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Maltose/maltodextrin ABC transporter, permease protein MalG
Montesol18-Sp2_coassembly_scaffold_989986_7
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5940..6929
-----------------
DNA (990bp)
protein (330aa)
wcaG; nucleoside-diphosphate-sugar epimerase (EC:5.1.3.-)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CX19_9BURK
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EIJ48162.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
Montesol18-Sp2_coassembly_scaffold_989986_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6926..7753)
-----------------
DNA (828bp)
protein (276aa)
VacJ-like lipoprotein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P3G2_AZOS1
vacJ-like lipoprotein
VacJ-like lipoprotein {ECO:0000313|EMBL:BAI74701.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_989986_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7934..8923
-----------------
DNA (990bp)
protein (330aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TL37_MESCW
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:KFC72169.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TRAP dicarboxylate transporter subunit DctP
Montesol18-Sp2_coassembly_scaffold_989986_10
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8985..9485
-----------------
DNA (501bp)
protein (167aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Curvibacter lanceolatus RepID=UPI000381BFFF
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KJR63460.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
TRAP dicarboxylate transport system, small permease component (DctQ-like)
Montesol18-Sp2_coassembly_scaffold_989986_11
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9485..10768
-----------------
DNA (1284bp)
protein (428aa)
UPI0003D1A48F related cluster n=1 Tax=unknown RepID=UPI0003D1A48F
Contig10, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50073.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
dctM5; TRAP C4-dicarboxylate transport system permease DctM
Montesol18-Sp2_coassembly_scaffold_989986_12
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10789..11442
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FD7C03
Uncharacterized protein {ECO:0000313|EMBL:KGB82964.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_989986_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11348..11692)
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZP79_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:KGM33767.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
competence-specific genes regulator
Montesol18-Sp2_coassembly_scaffold_989986_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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11812..12552
-----------------
DNA (741bp)
protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=alpha proteobacterium BAL199 RepID=A8U009_9PROT
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Betaproteobacteria_66_20_curated
Montesol18-Sp2_coassembly_scaffold_989986_15
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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12743..13405
-----------------
DNA (663bp)
protein (221aa)
Transcriptional regulator n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKK7_AZOSU
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEV27746.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Montesol18-Sp2_coassembly_scaffold_989986_16
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13635..14567
-----------------
DNA (933bp)
protein (311aa)
Malonate transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLK5_9PROT
Malonate transporter {ECO:0000313|EMBL:EKE78300.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative Auxin Efflux Carrier
Montesol18-Sp2_coassembly_scaffold_989986_17
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14643..15389)
-----------------
DNA (747bp)
protein (249aa)
Putative oxidoreductase protein, short-chain dehydrogenase/reductase {ECO:0000313|EMBL:ABE29741.1}; EC=1.-.-.- {ECO:0000313|EMBL:ABE29741.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
glucose-1-dehydrogenase n=1 Tax=Burkholderia kururiensis RepID=UPI0003465D57
short chain dehydrogenase family protein
Montesol18-Sp2_coassembly_scaffold_989986_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(15429..16181)
-----------------
DNA (753bp)
protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1L8_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDY19630.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
short-chain dehydrogenase/reductase SDR
Montesol18-Sp2_coassembly_scaffold_989986_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16305..17099)
-----------------
DNA (795bp)
protein (265aa)
Twin-arginine translocation pathway signal n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B2L4_ALCFA
fccB; Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain
Tax=RBG_16_Gamma2_65_34_curated
Displaying 19 items

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