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Montesol18_Sp65_coassembly_scaffold_1117298

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18_Sp65_coassembly_scaffold_1117298_1
unknown

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comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

Montesol18_Sp65_coassembly_scaffold_1117298_trna_1
unknown

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440..512
DNA (73bp)
transferRNA Pro
Montesol18_Sp65_coassembly_scaffold_1117298_2
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(513..1781)
DNA (1269bp) protein (423aa)
Nuclease SbcCD, D subunit n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIU3_ROSCS
nuclease SbcCD subunit D
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:ABU57401.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
Montesol18_Sp65_coassembly_scaffold_1117298_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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1890..2246
DNA (357bp) protein (119aa)
NADH-quinone oxidoreductase subunit A {ECO:0000255|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000255|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000255|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000255|HAMAP-Rule:MF_01394}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=NUOA_HERA2
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
Montesol18_Sp65_coassembly_scaffold_1117298_4
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

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2336..3598
DNA (1263bp) protein (421aa)
NADH-quinone oxidoreductase subunit H id=4012658 bin=GWA2_OP3_52_12 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of Montesol18_Sp65_coassembly_scaffolding errors
respiratory-chain NADH dehydrogenase subunit 1
Tax=GWA2_OP3_52_8_curated
Montesol18_Sp65_coassembly_scaffold_1117298_5
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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3602..4081
DNA (480bp) protein (160aa)
Putative NADH dehydrogenase (Ubiquinone) id=4012660 bin=GWA2_OP3_52_12 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of Montesol18_Sp65_coassembly_scaffolding errors
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
Tax=CG_Anaero_02
Montesol18_Sp65_coassembly_scaffold_1117298_6
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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4089..4400
DNA (312bp) protein (104aa)
NADH-quinone oxidoreductase subunit K 2 n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SA71_9CHLR id=1244970 bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
nuoK; NADH-quinone oxidoreductase chain K
Tax=RBG_16_Chloroflexi_56_8_curated
Montesol18_Sp65_coassembly_scaffold_1117298_7
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

4698..5621
DNA (924bp) protein (308aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3S5_ANATU
Tax=RBG_13_Chloroflexi_56_8_curated
Montesol18_Sp65_coassembly_scaffold_1117298_8
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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5579..6046
DNA (468bp) protein (156aa)
atm:ANT_10550 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=1244980 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
Tax=RBG_13_Chloroflexi_66_10_curated
Montesol18_Sp65_coassembly_scaffold_1117298_9
unknown

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6163..7983
DNA (1821bp) protein (607aa)

This feature has no annotations

Montesol18_Sp65_coassembly_scaffold_1117298_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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7980..9152
DNA (1173bp) protein (391aa)
PT repeat-containing protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3R4_SPHTD
PT repeat-containing protein
PT repeat-containing protein {ECO:0000313|EMBL:ACZ38881.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Montesol18_Sp65_coassembly_scaffold_1117298_11
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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9162..10088
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7H7_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01215.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Montesol18_Sp65_coassembly_scaffold_1117298_12

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comp(10217..10627)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9R5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38845.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
Montesol18_Sp65_coassembly_scaffold_1117298_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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10742..10861
DNA (120bp) protein (40aa)
Spermine synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C301_SPHTD
spermine synthase
Spermine synthase {ECO:0000313|EMBL:ACZ38618.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Displaying 14 items

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